Pairwise Alignments

Query, 346 a.a., xylose ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 357 a.a., sugar ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  146 bits (368), Expect = 9e-40
 Identities = 111/345 (32%), Positives = 176/345 (51%), Gaps = 33/345 (9%)

Query: 7   LLAGTAVLVSLHTAAIAADL------VVGVSWSNFQEERWKTDEAAIKAALDKAGAKYIS 60
           +L+G A+ + +   +I+A +      +VGV+       RW  D   +   L + G +   
Sbjct: 6   VLSGIALGLGVTLMSISAQVSAQSKQLVGVAMPTKSSARWIADGNNMVKVLKEKGYQTDL 65

Query: 61  ADAQSSAAKQLTDVESLISQGANALIILAQDSDAIGPAVEKAVAEGIPVVGYDRLIE-NK 119
             A+     QL+ +E+++++GA  L+I A D   +   ++KA  +G+ V+ YDRLI  +K
Sbjct: 66  QYAEDDIPNQLSQIENMLTKGAKVLVIAAIDGTTLTDVLQKAADKGVKVIAYDRLIRGSK 125

Query: 120 NA-FYITFDNKEVGRLQAAEVFKV------KPEGNYVFIKGSSSDPNADFLFAGQQEVLK 172
           N  +Y TFDN +VG LQA  + K       K   N     GSS D NA F + G   VLK
Sbjct: 126 NVDYYATFDNFQVGVLQAQSLEKALGLKEGKGPFNIELFGGSSDDNNAFFFYNGAMSVLK 185

Query: 173 AAMSSGKI----KNVG--EAYTDGWKPENAQKNMEQFLTK--NNNKVDAVVASNDGTAGG 224
             + SGK+    K +G  +  T  W P  AQ  M+  L+    N KV+AV++  DG + G
Sbjct: 186 PYIDSGKLVVRSKQMGMDKVATLRWDPATAQARMDNLLSAYYTNAKVNAVLSPYDGLSIG 245

Query: 225 AIAALAAQGMAGSVP------VSGQDADFAALNRVALGTQTVSVWKDSRELGKEAAGIAL 278
            +++L  +G+    P      VSGQDA+  ++  +  G Q  +++KD+REL K   G+  
Sbjct: 246 ILSSL--RGVGYGTPQQPFPYVSGQDAEVPSVKSIIRGEQYSTIFKDTRELAKVTVGMVD 303

Query: 279 ALAGGKKMTEIKGVTAFDGGPKKVTMQSVFLKPIAITKDNLGTVI 323
           A+ GGK+  +I     ++ G K V   S  LKP+ + K N   V+
Sbjct: 304 AVLGGKQ-PQINDTKTYNNGVKVV--PSYLLKPVVVDKSNWKEVL 345