Pairwise Alignments

Query, 346 a.a., xylose ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 340 a.a., xylitol ABC transporter, periplasmic substrate-binding protein (from data) from Dinoroseobacter shibae DFL-12

 Score =  428 bits (1101), Expect = e-125
 Identities = 222/341 (65%), Positives = 264/341 (77%), Gaps = 3/341 (0%)

Query: 6   KLLAGTAVLVSLHTAAIAADLVVGVSWSNFQEERWKTDEAAIKAALDKAGAKYISADAQS 65
           K +   A++ +  T +  AD+ VGVSWSNFQEERWKTDEAAIKAAL+ AGA Y+SADAQS
Sbjct: 3   KAILAAAIVAAGVTTSAYADVTVGVSWSNFQEERWKTDEAAIKAALEAAGATYVSADAQS 62

Query: 66  SAAKQLTDVESLISQGANALIILAQDSDAIGPAVEKAVAEGIPVVGYDRLIENKNAFYIT 125
           S+AKQL+DVESLI+QG +ALIILAQDS AIGPAV+ A  EGIPVVGYDRLIE+  AFY+T
Sbjct: 63  SSAKQLSDVESLIAQGVDALIILAQDSQAIGPAVQAAADEGIPVVGYDRLIEDPRAFYLT 122

Query: 126 FDNKEVGRLQAAEVFKVKPEGNYVFIKGSSSDPNADFLFAGQQEVLKAAMSSGKIKNVGE 185
           FDN EVGR+QA  V +  PEGNYV IKGS +DPNADFL  GQQE+L+ A+ +GKI  VGE
Sbjct: 123 FDNVEVGRMQARAVLEQAPEGNYVMIKGSPTDPNADFLRGGQQEILQDAIDAGKITIVGE 182

Query: 186 AYTDGWKPENAQKNMEQFLTKNNNKVDAVVASNDGTAGGAIAALAAQGMAGSVPVSGQDA 245
           AYTDGW P NAQ+NMEQ LT  +N+VDAVVASNDGTAGG +AAL AQGM G +PVSGQD 
Sbjct: 183 AYTDGWLPANAQRNMEQILTAQDNQVDAVVASNDGTAGGVVAALTAQGMEG-IPVSGQDG 241

Query: 246 DFAALNRVALGTQTVSVWKDSRELGKEAAGIALALAGGKKMTEIKGVTAFDGGPKKVTMQ 305
           D AALNRVA GTQTVSVWKD+R+LG+ A  IA+A+A G  M +I+G T++   P    + 
Sbjct: 242 DHAALNRVAKGTQTVSVWKDARDLGRAAGEIAVAMANGTAMADIEGATSWT-SPGGTELT 300

Query: 306 SVFLKPIAITKDNLGTVIDAGWIKKETACQGVKAGSVKACN 346
           + FL P+ +T DNL  V+DA WI +ET CQGV  G    CN
Sbjct: 301 ARFLAPVPVTADNLTAVVDAQWITQETLCQGVTDGPA-PCN 340