Pairwise Alignments

Query, 437 a.a., xylose ABC transporter permease from Agrobacterium fabrum C58

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (297), Expect = 2e-31
 Identities = 90/296 (30%), Positives = 147/296 (49%), Gaps = 20/296 (6%)

Query: 144 IIAFLNVPSFIVTLGGLLVWRGGTWFVTSGRTVAPMDSTFRLMGGGTSGSIGATWSWIAA 203
           +++FLN P+F      L + R      TS   +  +  T  ++  G   S+G+  +   A
Sbjct: 44  VVSFLN-PNFFTVDNLLNILRQ-----TSVNAIIAVGMTLVILTAGIDLSVGSVLALCGA 97

Query: 204 IVAC---------VAIVAAILNSRHQRRRFGFPLRPVWAEYFLVALGCFVVVGFVAVVNS 254
             A          VA+  A+L         G  +     + F+  L    ++  V +V +
Sbjct: 98  FAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVTMVYT 157

Query: 255 YPWPINIARNYAD-ANGIAWPDGGLFIPHGIAIPVLMALAVGAVMTFIATRLRFGRYVFA 313
              PI+    + D A+  AW   G  +  GI +PV + + V A   ++    RFGRYV+A
Sbjct: 158 DGRPISTG--FTDTADTFAWFGTGYTL--GIPVPVWLMVVVFAGAWYLLNHTRFGRYVYA 213

Query: 314 IGGNPEAAELAGIKTRWVTVKIFTLMGVLCAIAAAISTARLNAATNAQGELDELYTIAAA 373
           +GGN  A  L+GI    V + ++ + G+L A+A  I T+RL++A    G   EL  IAA 
Sbjct: 214 VGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAV 273

Query: 374 VIGGTSLAGGVGTIAGAMLGALVMQSLQSGMVLVGIDTPFQRIVVGVVLVVAVWLD 429
           V+GGTSL GG G I G ++GAL++  L + + L+ + + +Q I   VV+++AV +D
Sbjct: 274 VLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVD 329



 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 10/122 (8%)

Query: 56  FLTPRNLWNLSVQTASVAVMATGMVLVIVTRNIDLSVGSILGFSGMIMGVMQAEILPQIL 115
           F T  NL N+  QT+  A++A GM LVI+T  IDLSVGS+L   G     + A  +P   
Sbjct: 52  FFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLALCGAFAATLVAMEVPV-- 109

Query: 116 GFEHWATWIVTLLVGILVGGAIGMLQGSIIAFLNVPSFIVTLGGLLVWRGGTWFVTSGRT 175
                   +V +   +L G A+G + G IIA   V +FI TL  + + RG T   T GR 
Sbjct: 110 --------LVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVTMVYTDGRP 161

Query: 176 VA 177
           ++
Sbjct: 162 IS 163