Pairwise Alignments

Query, 437 a.a., xylose ABC transporter permease from Agrobacterium fabrum C58

Subject, 338 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  110 bits (276), Expect = 5e-29
 Identities = 57/146 (39%), Positives = 90/146 (61%)

Query: 284 IAIPVLMALAVGAVMTFIATRLRFGRYVFAIGGNPEAAELAGIKTRWVTVKIFTLMGVLC 343
           I +PV++   V  +   I  +  FGRYV+A+GGN ++A  +GI T  + + ++ + G L 
Sbjct: 186 IPVPVVILALVFLLAWVILNKTVFGRYVYAVGGNEKSARTSGINTGAILIWVYVVAGFLA 245

Query: 344 AIAAAISTARLNAATNAQGELDELYTIAAAVIGGTSLAGGVGTIAGAMLGALVMQSLQSG 403
            +A  I TA+  +A  + G   EL  IAA VIGG SLAGGVG + G   GAL++  + +G
Sbjct: 246 GVAGVILTAKTGSAQTSAGSSYELDAIAAVVIGGASLAGGVGRLTGTFFGALIIGVMNNG 305

Query: 404 MVLVGIDTPFQRIVVGVVLVVAVWLD 429
           + ++G+ + +Q I+ G ++VVAV LD
Sbjct: 306 LDILGVQSFYQLIIKGGLIVVAVILD 331



 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 53/137 (38%), Positives = 72/137 (52%), Gaps = 7/137 (5%)

Query: 56  FLTPRNLWNLSVQTASVAVMATGMVLVIVTRNIDLSVGSILGFSGMIMGVMQAEILPQIL 115
           FLT  NL  +  Q +   V+A GM  V+++  IDLSVGS+L FSGM    M A +  + +
Sbjct: 48  FLTVNNLMLILHQISVNGVLAVGMTFVVISAGIDLSVGSVLAFSGM----MAASMATRSV 103

Query: 116 GFEHWATW---IVTLLVGILVGGAIGMLQGSIIAFLNVPSFIVTLGGLLVWRGGTWFVTS 172
           G   W+     I  ++  + VG   G L G IIA   + +FI TLG LL  RG T  VT 
Sbjct: 104 GVTPWSDTYPVIFPIIAALGVGALCGGLSGWIIARFRIQAFIATLGMLLAARGFTMSVTG 163

Query: 173 GRTVAPMDSTFRLMGGG 189
           G  ++ +   FR  G G
Sbjct: 164 GNPISGLSPDFRWFGTG 180