Pairwise Alignments

Query, 260 a.a., xylose ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  175 bits (444), Expect = 1e-48
 Identities = 87/236 (36%), Positives = 150/236 (63%), Gaps = 1/236 (0%)

Query: 8   LVEMRNISISFGGIHAVENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRDGGEILI 67
           ++ +  I  +F G+ A++ AS++++PG V+AL+G NGAGKSTL+K+L+G Y +D G I  
Sbjct: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64

Query: 68  NGEDADIRNPRDAKKYGIETIYQTLAVADNVDAAANLYLGRELKTKWGTLDDVAMEASAR 127
            G+    + PRD++  GI  I+Q L +   +  A N++LGRE+ + +G +    M   A 
Sbjct: 65  QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKAD 124

Query: 128 EVMGRLNPNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVGD 187
           +++ RLN      K  +  LS G++Q V IA+A+ F+++++IMDEPT AL   ET  + +
Sbjct: 125 QLLARLNVK-HSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFN 183

Query: 188 LVKELKRQGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVLGMII 243
           ++ EL+ QG GI  ISH + ++F++ D + V+++GK +G  R  D  +D ++ M++
Sbjct: 184 VINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMV 239



 Score = 97.1 bits (240), Expect = 7e-25
 Identities = 65/252 (25%), Positives = 127/252 (50%), Gaps = 18/252 (7%)

Query: 9   VEMRNISISFGGIHAVENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRDGGEILIN 68
           + +  I ++  G+H V   S  L  GE++ + G  GAG++ L+K++ GA   + G I +N
Sbjct: 257 ISLEVIGLTGSGVHDV---SFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLN 313

Query: 69  GEDADIRNPRDAKKYGIETIYQT---------LAVADNVDAAANLYLGRELKTKWGTLDD 119
           G   +  +P+D    GI  I +          L+V +N+   A   L + ++ +    D+
Sbjct: 314 GRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRHA--DE 371

Query: 120 VAMEASAREVMGRLNPNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGP 179
           V        +     P+  +    +  LSGG +Q VAIA+ ++   ++LI+DEPT  +  
Sbjct: 372 VIAVDDFIRLFNIKTPSREQI---IGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDV 428

Query: 180 QETAQVGDLVKELKRQGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVL 239
               ++  L+ + K +G+ I L+S ++ +V  ++DR+ VM  G++ G     +  +++++
Sbjct: 429 GAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLM 488

Query: 240 GMIILGKVPAGA 251
              + G+ PA A
Sbjct: 489 ACAV-GRNPAHA 499