Pairwise Alignments

Query, 260 a.a., xylose ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 504 a.a., sugar ABC transporter ATP-binding protein from Rahnella sp. WP5

 Score =  176 bits (445), Expect = 1e-48
 Identities = 93/247 (37%), Positives = 150/247 (60%), Gaps = 8/247 (3%)

Query: 1   MTDQVTPLVEMRNISISFGGIHAVENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRR 60
           M+D  TPL+ ++ IS  F G+ A+ N  VDL+PG+V AL+G NGAGKSTL+K+++G Y+ 
Sbjct: 1   MSDSATPLLSLKGISKVFPGVRALNNVHVDLYPGKVTALIGENGAGKSTLVKVMTGIYQP 60

Query: 61  DGGEILINGEDADIRNPRDAKKYGIETIYQTLAVADNVDAAANLYLGREL-KTKWGTLDD 119
           + GE+        + NP  A K GI  I+Q   + D +    N+++G  L +  +  L+ 
Sbjct: 61  EEGELHYKAIPIKLPNPESAHKIGITAIHQETVLFDELSVTENIFVGHYLYRGIFKRLNW 120

Query: 120 VAMEASAREVMGRLNPNFRRFKEP---VKALSGGQRQSVAIARAILFDARILIMDEPTAA 176
            AM   AR+++ RL  N     +P   +K LS  QR  VAIARA+ FDA+++I+DEPTAA
Sbjct: 121 PAMHQQARDILTRLEVNI----DPHAILKELSIAQRHMVAIARALSFDAQVVILDEPTAA 176

Query: 177 LGPQETAQVGDLVKELKRQGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKD 236
           L   E  +   +V+ LK++G  I  ISH   ++F ++D   V+++G  VG  +  D+++ 
Sbjct: 177 LSQHEIVEFYQIVERLKQEGKAILFISHKFDEIFSISDYYTVLRDGSYVGSGKISDISEQ 236

Query: 237 EVLGMII 243
           +++ M++
Sbjct: 237 QMVTMMV 243



 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 68/239 (28%), Positives = 122/239 (51%), Gaps = 14/239 (5%)

Query: 8   LVEMRNISISFGGIHAVENASVD--LFPGEVVALLGHNGAGKSTLIKILSGAYRRDGGEI 65
           ++E++N+S      H  E A ++  L  GE++   G  GAG++ L++ L G  + +GG+I
Sbjct: 262 VLEVQNLS------HPTEFAGINFSLRKGEILGFYGLVGAGRTELMQALFGVTQPNGGKI 315

Query: 66  LINGEDADIRNPRDAKKYGIETI---YQTLAVADNVDAAANLYLGR--ELKTKWGTLDDV 120
           LING++     P  A + GI  +    Q      ++  + N+ L +  +L  + G L+D 
Sbjct: 316 LINGKEHHFSRPSQAIRAGIVYVPEERQKQGAIIDLPISQNISLPQLSQLNPR-GVLNDK 374

Query: 121 AMEASAREVMGRLNPNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQ 180
              A A +   RL      +K+ V  LSGG +Q V IA+ +     I+I+DEPT  +   
Sbjct: 375 KEWALADDYARRLQVKASSWKQAVGTLSGGNQQKVVIAKWLATKPDIIILDEPTKGIDIG 434

Query: 181 ETAQVGDLVKELKRQGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVL 239
             A V   + EL  +G+ + ++S ++ +V  +ADR+ VM  G +V      + + + ++
Sbjct: 435 SKAAVHQFMSELVGRGLAVIMVSSELPEVMGMADRIIVMHEGLMVAEFNAGEASAEMIV 493