Pairwise Alignments

Query, 398 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 400 a.a., YcaO-related McrA-glycine thioamidation protein from Methanococcus maripaludis S2

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 83/284 (29%), Positives = 129/284 (45%), Gaps = 27/284 (9%)

Query: 19  LLRRFGITRVGDVTGLDIIGIPVWFAARPNSR--GLSVSQGKGLFADQARLSAIMEAIEG 76
           +++  G+TR   + GLD IGIPV+ + RP+++   +SV  GKG    QA++S+ MEAIE 
Sbjct: 27  IIKEIGVTRTARIDGLDRIGIPVFSSIRPSAKDGAISVYAGKGATEIQAKVSSTMEAIE- 85

Query: 77  AVAEETRRHVTAFGSIEEMRNKGVPLIPFETVGRIDPDALDLR----KERAWVKGTSIRQ 132
                  R+   F    ++     P  P      I P          K   WV G  I  
Sbjct: 86  -------RYSAEFDENSKLELTKEPENPINLDDLILPGGKSAEYTDTKGIDWVIGKDIIS 138

Query: 133 QQEVFAPYELIGMDFRAEFPWD-RQAFRMSSQGLAAGFEQDHAVLHALLELIENDASFLV 191
            +    P         A  P D ++ FR ++ GLA+G  ++ AV H +LE+IE DA  + 
Sbjct: 139 GKSFDVPIN------SAVHPHDGKKLFRSNTNGLASGNSEEEAVFHGMLEVIERDAWSIS 192

Query: 192 DTFETRAITPQPFLLSAGMDSLLDDLIQHLSNIGLPPSFFDLTNALGVPVVMASLPRSLQ 251
           +  +    T +   +    + L+ +L++      +     DLT+ +G+P V A     + 
Sbjct: 193 ELSKN---TYRKVNVENAKNPLIFELLEKFKKAKINIILKDLTSEVGIPTVAAISDDDVL 249

Query: 252 AEDGPATRSAAGAACRPNTHAAAMAALLEAIQSRLTDISGARDD 295
            +  PA     G  C  +   A + AL E  QSR T I GAR+D
Sbjct: 250 KD--PAL-LCMGVGCHLHPEIAVLRALTEVAQSRATQIHGARED 290