Pairwise Alignments

Query, 160 a.a., transcription elongation factor regulatory protein from Agrobacterium fabrum C58

Subject, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

 Score = 45.8 bits (107), Expect = 3e-10
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 18/133 (13%)

Query: 30  LVTQAGLKALEQQLQLA--------RQACEAANAIEDINERRRLSASPLRDMRYFAERVR 81
           L+T+AG   L+Q+L            Q    A ++ D +E    + +  R +R    RVR
Sbjct: 5   LITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNK-RLLRQIDRRVR 63

Query: 82  -TAQLMPD-------PQADGVVAFGSLVTFSRDDGRTQRFRIVGEDEA-DPAAGTMSYVS 132
             ++L+P+       PQ +G V FG+ V    + G  ++FRIVG +E    A   +S  S
Sbjct: 64  FLSKLLPELKIVDYSPQQEGKVFFGAWVEIENEAGEVKKFRIVGPEEIYGDAKDYISIDS 123

Query: 133 PVARVLMGKTIGD 145
           P+AR L+ K + +
Sbjct: 124 PMARALLKKQVDE 136