Pairwise Alignments

Query, 185 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 188 a.a., HNH endonuclease from Phaeobacter inhibens DSM 17395

 Score =  175 bits (443), Expect = 5e-49
 Identities = 96/189 (50%), Positives = 127/189 (67%), Gaps = 9/189 (4%)

Query: 1   MTIAVSPQALPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVNIIAEYDH-AVSSPSF 59
           MT+AV    L  L+LNAD +PLS+ PLS+ +WQDA  AV  +RV  +  YD  AV S S 
Sbjct: 1   MTVAVGN--LRTLILNADMQPLSWAPLSVCNWQDAFVAVHQERVIQVKTYDDVAVHSASD 58

Query: 60  SMRLPSVVSLKTYVQPIRNPAFTRFNVFLRDKFECQYCGTR---DELTFDHVIPRAHGGE 116
           +  +P+VV+LK Y +  +  AFTR+NVFLRD+F CQYCG R    +LTFDHVIPR+ GG 
Sbjct: 59  TFEVPAVVALKRY-RKRKKVAFTRYNVFLRDEFCCQYCGNRFAAKDLTFDHVIPRSKGGA 117

Query: 117 TTWHNVVAACSPCNLRKGSKLPKQAGMFPAQKPFQPTVQDLHNNGRLF--PPNYLHESWM 174
           ++W N+VA CS  NLRKG+  P+Q G+   +KPF P+  +L    R    P   LH++WM
Sbjct: 118 SSWTNIVACCSADNLRKGNLKPQQVGLKLRRKPFAPSPHELDAIARRLPRPKPELHQTWM 177

Query: 175 DYLYWDTEL 183
           D+LYWD+EL
Sbjct: 178 DFLYWDSEL 186