Pairwise Alignments

Query, 513 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 503 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  348 bits (892), Expect = e-100
 Identities = 202/474 (42%), Positives = 303/474 (63%), Gaps = 8/474 (1%)

Query: 6   VFQARNVEKVFPGVRALKGVNLSLQPGSIHALLGENGAGKSTLIKVVTGVHHQSSGQILV 65
           + +  +V K F  V ALKG+ L ++ G +H LLGENGAGKSTL+K++ GVH  +SG+I++
Sbjct: 9   ILKITDVTKSFGQVAALKGMRLEVRRGRVHTLLGENGAGKSTLMKILAGVHGATSGEIVL 68

Query: 66  DGQAVRFSNPREAIARGIGVVHQERNLIPRFSIAENIHMEKLGAHYLKPIDYAALNRDAR 125
           DGQA R +NP+EA + G+ +V QE +L    ++AENI   +    +   I+  AL   A 
Sbjct: 69  DGQAYRPANPQEAASLGLAIVFQELSLCNNLTVAENILATREPRRF-GFINDKALVAKAH 127

Query: 126 RWLEALNLEIDPATPVSELSVAQMQLVEIAKALSLQSRVLLLDEPTTSLTPSETDNLFRI 185
           R +  L L ID    V  LS+AQ QLVEIAK LS  ++V++LDEPT+SL+ SE + LF I
Sbjct: 128 RIVADLRLPIDVTEKVGNLSIAQRQLVEIAKGLSHDAKVVILDEPTSSLSDSEAEILFEI 187

Query: 186 LRRLRDDGASLVFVSHKLEEVLDICDRVTVLRDGENACESRSMEGLGRQDLVRLMIGRAE 245
           + RLR  GA+++++SH++EE++ + D +TV+RDGE    + + + +  + L+ LM+GR  
Sbjct: 188 IGRLRQRGAAIIYISHRMEEIMRLSDDITVIRDGEYV-STHARDEVTIETLIALMVGRRM 246

Query: 246 SG---GGWRKRAVEHNPMVLELEGVSTAIGHGDVSLSVRKGEIVGLYGLVGAGRTELAKS 302
                      A +  P VL ++ ++      DVS  VR GEI+G +GLVG+GR+E+  +
Sbjct: 247 DEIYPPPVHHVAADRAP-VLAVDRLTREGEFQDVSFDVRAGEILGFFGLVGSGRSEVMNA 305

Query: 303 IMGKFAVTSGNVRVSGRPARIRSVAEAIHDYGVGYVSEDRKGDGLILQHSVLANAGVPIW 362
           + G  +  +G VR+ G   R RS  +AI   GVG+V+E+RK +GL+L HSV  N  +   
Sbjct: 306 LFGMKSA-AGTVRLDGEVVRFRSPDQAIAR-GVGFVTENRKEEGLVLGHSVEWNISMAAL 363

Query: 363 RKLSNTFGVLSDGRIRAAVTPFLKKLEVKTPSLSQTVGNLSGGNQQKISVAKWLAADVKL 422
              +   G + +G  RAA +  + KL +KT SL    G LSGGNQQKI +AKWL    K+
Sbjct: 364 ADFAGGLGFIRNGAERAAASEQVGKLSIKTNSLETPAGALSGGNQQKIVLAKWLLTRPKV 423

Query: 423 LIVDEPSVGIDIKTKAYLHDLLRELADNGTAILVITSDMPEMVALADRIVVMDQ 476
           LI+DEP+ G+D+  K  ++ ++RELA  GTAIL+I+SD+PE++ ++DR+VVM +
Sbjct: 424 LILDEPTRGVDVGAKFEIYKIIRELAAEGTAILLISSDLPEVLGMSDRVVVMHE 477



 Score = 94.4 bits (233), Expect = 9e-24
 Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 7/201 (3%)

Query: 25  VNLSLQPGSIHALLGENGAGKSTLIKVVTGVHHQSSGQILVDGQAVRFSNPREAIARGIG 84
           V+  ++ G I    G  G+G+S ++  + G+   ++G + +DG+ VRF +P +AIARG+G
Sbjct: 279 VSFDVRAGEILGFFGLVGSGRSEVMNALFGMK-SAAGTVRLDGEVVRFRSPDQAIARGVG 337

Query: 85  VV---HQERNLIPRFSIAENIHMEKLG--AHYLKPIDYAALNRDARRWLEALNLEIDPA- 138
            V    +E  L+   S+  NI M  L   A  L  I   A    A   +  L+++ +   
Sbjct: 338 FVTENRKEEGLVLGHSVEWNISMAALADFAGGLGFIRNGAERAAASEQVGKLSIKTNSLE 397

Query: 139 TPVSELSVAQMQLVEIAKALSLQSRVLLLDEPTTSLTPSETDNLFRILRRLRDDGASLVF 198
           TP   LS    Q + +AK L  + +VL+LDEPT  +       +++I+R L  +G +++ 
Sbjct: 398 TPAGALSGGNQQKIVLAKWLLTRPKVLILDEPTRGVDVGAKFEIYKIIRELAAEGTAILL 457

Query: 199 VSHKLEEVLDICDRVTVLRDG 219
           +S  L EVL + DRV V+ +G
Sbjct: 458 ISSDLPEVLGMSDRVVVMHEG 478