Pairwise Alignments

Query, 513 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 512 a.a., sugar ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  340 bits (872), Expect = 7e-98
 Identities = 202/491 (41%), Positives = 295/491 (60%), Gaps = 13/491 (2%)

Query: 1   MDKQPVFQARNVEKVFPGVRALKGVNLSLQPGSIHALLGENGAGKSTLIKVVTGVHHQSS 60
           M  + V + RNV K F  V+AL  V+  L  G +HAL GENGAGKSTL+ V+ GV   S 
Sbjct: 1   MTSETVLEIRNVSKHFGAVKALTAVDFRLARGEVHALCGENGAGKSTLMNVIAGVLQPSE 60

Query: 61  GQILVDGQAVRFSNPREAIARGIGVVHQERNLIPRFSIAENIHMEKLGAHYLKPIDYAAL 120
           G++L++G  V+ ++P  A + GI +VHQE  L P  +IAEN+ M          ++YA L
Sbjct: 61  GEVLIEGAPVKIASPAVAQSLGIALVHQEIALCPDATIAENMFMAATNRRRSALMNYAQL 120

Query: 121 NRDARRWLEALNLEIDPATPVSELSVAQMQLVEIAKALSLQSRVLLLDEPTTSLTPSETD 180
            RDA+  +  L   ID +  V +L ++  QLVEIAKAL+L  RVL+ DEPT +LT +E  
Sbjct: 121 ERDAQAVMNRL-APIDVSQKVGDLPISSQQLVEIAKALTLDCRVLIFDEPTAALTETEAQ 179

Query: 181 NLFRILRRLRDDGASLVFVSHKLEEVLDICDRVTVLRDGENACESRSMEGLGRQDLVRLM 240
            LF I+R L+  G S++++SH++ EV  +CDRVTV RDG     +  +  +   D+VRLM
Sbjct: 180 VLFGIIRDLKARGISIIYISHRMAEVFSLCDRVTVFRDGRYVA-TEMVSDVTPDDVVRLM 238

Query: 241 IGRAESG-----GGWRKRAVEHNPMVLELEGVSTAIGHGDVSLSVRKGEIVGLYGLVGAG 295
           +GR  S          +R  E    V +L G        DVS  +R GEI+G+ GL+G+G
Sbjct: 239 VGREISQLYPDKQPSSERLGEPILSVRDLGGERFR----DVSFELRYGEILGVGGLIGSG 294

Query: 296 RTELAKSIMGKFAVTSGNVRVSGRPARIRSVAEAIHDYGVGYVSEDRKGDGLILQHSVLA 355
           RTE+A+ I     VT G +R+  +  R+R  ++A    GV Y+SEDRKG G+ L  S+  
Sbjct: 295 RTEIAEGICALRPVTQGEIRLHDKVLRLRRYSDAAKA-GVVYLSEDRKGSGVFLDLSIAQ 353

Query: 356 NAGVPIWRKLSNTFGVLSDGRIRAAVTPFLKKLEVKTPSLSQTVGNLSGGNQQKISVAKW 415
           N      + L++  G+L+    RA      ++L V+   +   V +LSGGNQQK+++AK 
Sbjct: 354 NIAALDLKALTS-LGLLNSREERALAEDLTRRLGVRMGGVDMPVSSLSGGNQQKVAIAKQ 412

Query: 416 LAADVKLLIVDEPSVGIDIKTKAYLHDLLRELADNGTAILVITSDMPEMVALADRIVVMD 475
           LA D K++++DEP+ GID+  K+ +H LLRELA  G  ILVI+S++PE++ L DR++V+ 
Sbjct: 413 LAVDPKVILMDEPTRGIDVGAKSEIHRLLRELARAGIGILVISSELPELIGLCDRVLVVR 472

Query: 476 QYRVKGIVENN 486
           + R+ G V  N
Sbjct: 473 EGRIAGEVSGN 483