Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (336), Expect = 4e-36
 Identities = 89/313 (28%), Positives = 157/313 (50%), Gaps = 19/313 (6%)

Query: 19  LLVTVMAIVVIRGFSPNFLSSFNIQILLLAISVNALIAFSQMIIIAIGQMNLSVGAIGGL 78
           +L  ++AI+VI+   P+FLS  N+  +L   SV  +IA     +I     +LS G   GL
Sbjct: 22  VLFILLAIIVIQ--EPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVGL 79

Query: 79  AAISFAGLMQ-----------VWGLPAPVAAIAAMLIGIVCGMLNGLLIAITGISAFVIT 127
           AA+  A L+Q           +  +P     I+  LIG + G++NG+++A   ++ F+ T
Sbjct: 80  AAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIAT 139

Query: 128 LATLSIYKGIN---LGITRAEPFYGIPESVKDFGSALI-VGPV--PWLAAPTIIVAFALW 181
           L T+ I  GIN        A P  G  E    F    I +G     ++    II    +W
Sbjct: 140 LGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFMW 199

Query: 182 FMLRRQPIGRFILAIGGNSHAAELSGISVRMTVIVAHGISGFLASVAGILLVSRLQIGQP 241
            +  +   G+ I A+GGN  AA++SG++V +T++  + +SG   +  G+L   R+     
Sbjct: 200 VLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSATN 259

Query: 242 SIGDDWLILSFAAPVIGGAVLAGGHVSVGATLLGVVIVAIITQALVLFSIDPFLVQVVLG 301
           ++G  + + + AA V+GG   AGG  S+   + GV+I  +I   +    + P+   ++ G
Sbjct: 260 NLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYIIKG 319

Query: 302 AMILAAVGINRLR 314
           ++I+ AV ++ ++
Sbjct: 320 SIIIFAVALDSMK 332