Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 317 a.a., L-arabinose transporter permease from Sinorhizobium meliloti 1021

 Score =  134 bits (338), Expect = 2e-36
 Identities = 98/305 (32%), Positives = 158/305 (51%), Gaps = 16/305 (5%)

Query: 17  GPLLVTVMAIVVIRGFSPNFLSSFNIQILLLAISVNALIAFSQMIIIAIGQMNLSVGAIG 76
           G L++   A VV+    PNFL+  N+  LL ++    ++A + M  +A    +LSVG+  
Sbjct: 14  GLLVIFAAAFVVVALTVPNFLTERNMLGLLQSVVTIGVVACTMMFCLASRDFDLSVGS-- 71

Query: 77  GLAAISFAGLMQVWGLPAPVAAIAAMLIGIVCG----MLNGLLIAITGISAFVITLATLS 132
               ++F+G++ V    A  + +  +L  + CG    + NG++IA   I+A + TLAT+ 
Sbjct: 72  ---TVAFSGMVAVMASNATGSIVLGLLAALACGGIVGLANGIVIARFRINALITTLATMQ 128

Query: 133 IYKGINLGITRAEPFYGIPESV--KDFGSALIVGPVP-WLAAPTIIVAFALWFMLRRQPI 189
           I +G  L I       GI + V  +   S  +  P P W+ A   IV     F+L R   
Sbjct: 129 IVRGFAL-IASDGRAVGINDPVFYQLSLSKFLTVPTPIWVMALFFIV---FGFLLNRTVF 184

Query: 190 GRFILAIGGNSHAAELSGISVRMTVIVAHGISGFLASVAGILLVSRLQIGQPSIGDDWLI 249
           G+  LAIGGN  A+ L+G+ V    I    + G + +VAG+LL SR+  GQP+      +
Sbjct: 185 GKNTLAIGGNPEASRLAGVDVARMRIWIFALQGLVCAVAGVLLASRITSGQPNAATGLEL 244

Query: 250 LSFAAPVIGGAVLAGGHVSVGATLLGVVIVAIITQALVLFSIDPFLVQVVLGAMILAAVG 309
              +A V+GG  LAGG  ++   ++GV+I+ I    + L +I  F   VV G ++L AV 
Sbjct: 245 SVISACVLGGVSLAGGRATMTGVVVGVLIMGIAENVMNLLNIQAFYQYVVRGLILLIAVL 304

Query: 310 INRLR 314
           ++ +R
Sbjct: 305 LDNMR 309