Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 354 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  156 bits (395), Expect = 6e-43
 Identities = 103/325 (31%), Positives = 170/325 (52%), Gaps = 22/325 (6%)

Query: 5   NTLLRLARTDWFGPLLVTVMAIVVIRGFSPNFLSSFNIQILLLAISVNALIAFSQMIIIA 64
           + LL L +   F  L   V    +   F+PNFLS+ N+ ++   +++NA +A     +I 
Sbjct: 17  SVLLTLMKLRTFIALFAVVAFFSI---FAPNFLSTANLILMSKHVALNAFLAMGMTFVII 73

Query: 65  IGQMNLSVGAIGGLAAISFAGLM----------QVWGLPAPVAAIAAMLIGIVCGMLNGL 114
            G ++LSVG+I GL  +   GL+           V+     V  I  + +GIV G +NGL
Sbjct: 74  TGGIDLSVGSIVGLCGMVAGGLILNGIDLQFGYTVYFNVVEVCLIT-LAVGIVIGAVNGL 132

Query: 115 LIAITGISAFVITLATLSIYKGINLGITRAEPF---YGIPESVKD----FGSALIVGPVP 167
           LI    ++ F+ TL TL + +G  L  +  + F    G PE         GS  ++G +P
Sbjct: 133 LITKLNVAPFIATLGTLYVARGFALLSSGGQTFPNLVGKPELATTGFAFLGSGRLLG-LP 191

Query: 168 WLAAPTIIVAFALWFMLRRQPIGRFILAIGGNSHAAELSGISVRMTVIVAHGISGFLASV 227
                 I+VA A  ++ R  PIGR I A+GGN  AA +SGI V    +  +  SGF A++
Sbjct: 192 VSIWVLIVVALAAAYVARYTPIGRHIFAVGGNERAARMSGIRVDRVKMFVYMFSGFCAAI 251

Query: 228 AGILLVSRLQIGQPSIGDDWLILSFAAPVIGGAVLAGGHVSVGATLLGVVIVAIITQALV 287
            G+++ S L    P+ G+ + + + AA V+GG  ++GG  ++G T++G  ++ I++  LV
Sbjct: 252 VGLVISSELMASHPATGNSFELNAIAAAVLGGTSMSGGRGTIGGTIIGAFVIGILSDGLV 311

Query: 288 LFSIDPFLVQVVLGAMILAAVGINR 312
           +  I  F   V+ G +I+ AV +++
Sbjct: 312 MMGISSFWQMVIKGIVIIVAVVVDQ 336