Pairwise Alignments

Query, 295 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 266 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  118 bits (296), Expect = 1e-31
 Identities = 71/247 (28%), Positives = 130/247 (52%), Gaps = 6/247 (2%)

Query: 22  SLIAFVLVIGALLVVAPLIIIGVEAFSQGWKVYSSTITHPDTRHAIMLTVLTALIAVPVN 81
           SL A  + I  +L++   I+  +      ++ +  ++   + + AI L++ TA IA  + 
Sbjct: 11  SLFALSVFILFILMIVMSIVTNIS-----FETFYDSLFSKEIQFAIKLSLETASIATILG 65

Query: 82  TAFGVAAAWAITKFDFPGRRFLLVLIEIPFSISPIVAGVAYLFVYGLQGLFGPFLDAHDI 141
           T  GV AA+A+ +++F G+  +  ++E+P  + P++ G A L  +G   +FG F+  + I
Sbjct: 66  TLLGVPAAYALARYNFKGKDIVDSIVELPVILPPLITGFALLVFFG-NTVFGKFITENII 124

Query: 142 KILFALPGIVIASMFVTAPFVARELIPLMQAQGRDLEEAATSLGASGWRTFFSVTLPNIK 201
           +ILF   G ++A  FV  PF+ R    + +      E  A SLG+  + +F  V +P  K
Sbjct: 125 EILFTYKGTIVAQFFVATPFIIRTSKSVFECIDEKYELIAQSLGSKKYESFLDVVIPMAK 184

Query: 202 WALLYGVVLCNARVMGEFGAVSVVSGNIRGQTNTLPLHIELLYHDYQTAGAFASASILAL 261
             ++ G +L  AR +GEFGA  +++G  + +T TLP+ + L         A A + I  L
Sbjct: 185 NGIIAGAILAWARSIGEFGATMMLAGATKMKTETLPIAVFLNISLGDLEKALAVSLIFLL 244

Query: 262 LAVVTII 268
           +A + ++
Sbjct: 245 VATLVLV 251