Pairwise Alignments

Query, 295 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 281 a.a., sulfate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  140 bits (353), Expect = 3e-38
 Identities = 80/255 (31%), Positives = 136/255 (53%), Gaps = 6/255 (2%)

Query: 20  RRSLIAFVLVIGALLVVAPLIIIG------VEAFSQGWKVYSSTITHPDTRHAIMLTVLT 73
           +R L  F + +G  L+   LI++       ++     W  Y   I  P    +  +T+L+
Sbjct: 11  KRVLPGFSISLGVSLLFVSLILLLPTTGLIMQTSQMSWSEYWGVIADPRVLASYKVTILS 70

Query: 74  ALIAVPVNTAFGVAAAWAITKFDFPGRRFLLVLIEIPFSISPIVAGVAYLFVYGLQGLFG 133
           AL A   N  FG+  AW + +++FPG+R L  L+++PF++   VAG+    +Y   G  G
Sbjct: 71  ALAASIFNCLFGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLATLYAENGQIG 130

Query: 134 PFLDAHDIKILFALPGIVIASMFVTAPFVARELIPLMQAQGRDLEEAATSLGASGWRTFF 193
             L    IK+ +   GIV+A +F + PFV R + P+++    + EEA  +LGA+    F+
Sbjct: 131 SLLAELGIKVAYTPLGIVVAMIFTSIPFVVRTVQPVLEELSHEEEEAGMTLGATDAAVFW 190

Query: 194 SVTLPNIKWALLYGVVLCNARVMGEFGAVSVVSGNIRGQTNTLPLHIELLYHDYQTAGAF 253
            V LP++  AL+ G  L   R +GEFGAV  ++GN+   +    L I +   ++  AGA 
Sbjct: 191 RVILPSLWPALMVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVRLQEFDFAGAS 250

Query: 254 ASASILALLAVVTII 268
           A ASI+ + +++ ++
Sbjct: 251 AIASIVLMTSLLLLL 265