Pairwise Alignments

Query, 644 a.a., diguanylate cyclase from Agrobacterium fabrum C58

Subject, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  312 bits (799), Expect = 4e-89
 Identities = 196/568 (34%), Positives = 309/568 (54%), Gaps = 33/568 (5%)

Query: 102 DLVTRLDAILAHLEQEVNTLDPAEVPDLLAAMSALDAPMTTLASSSVAYDVNLIDTAHED 161
           D++TR +  ++   Q V+ L     P +    + L  P + +    +++ ++    A   
Sbjct: 96  DVMTRKEKAISEQSQLVSVLASYLTPAVSVFSAELHQPNSNVVVGKLSFYIDGSSIAKVF 155

Query: 162 VRKL-HIVYTALAGGLILCGIAL----------VILLLRQNDLLNRAQKSMRGLT----D 206
           + K   ++   L    +L  I L          + +L+   + LN  Q+S   L     D
Sbjct: 156 IAKTTRVLLFDLLRNTLLTTILLLFFYQKLSRPITMLITWVNSLNDTQRSPLPLRLTHDD 215

Query: 207 DLR--AATLELQAKNVRLEHD-----AYHDALTGLPNRSLFRQELIERLRRSFGGTGTTA 259
           +L   A+T +   K   L        AY+D+LTGL NRSL  Q+L + +  +     T  
Sbjct: 216 ELSELASTFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGV 275

Query: 260 ILLLDLDGFKDVNDTLGHDAGDALLQAVAQRLSAIGGDYDMVCRLGGDEFAVVSDDLNED 319
           +  LDLD FK +ND+LGH  GD L++AVA R+ A   +  +  R+GGDEFAV+   L+  
Sbjct: 276 LFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPA 335

Query: 320 AARRLSTKLIDQISRTYQLGEQEVKIGTCIGIAI--SHGAVDADELFKRADLALYEAKAI 377
            A  ++ +L+  IS  Y + + +      IGI++  S G+ + D L ++AD ALY AKA 
Sbjct: 336 KAEEVAKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVL-RQADTALYRAKAS 394

Query: 378 GPGRASVFKVRMQKQLTEKKSFEADLQTALQNDEMEVYYQPQVATQTRKLCGFEALLRWK 437
           G  +   ++  MQ Q+      E  L  AL   ++E++YQPQV  Q   + G EAL+RW 
Sbjct: 395 GRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVDEQ-HNIIGVEALIRWN 453

Query: 438 HPVRGDVPPSVFIPVAERTGLIHSLGKWVMETACREAMGWDED-------MKVAVNLSPV 490
           HP RG +PP VF+P+AE TG I  +G W++E AC +   W +         ++A+N+SP+
Sbjct: 454 HPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPL 513

Query: 491 QFHSTNLIQNVMGALEKSGLEPSRLELEITESILLNKSDQTINTLSRLKAVGIKIAMDDF 550
           QF   + I+ V  AL ++G+    +ELEITES+LL   +  I  +++LK   I I++DDF
Sbjct: 514 QFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDF 573

Query: 551 GTGYSSLANLRGVPFDKIKIDRSFLRDITSDRDALAIVEFVVGVGRSLRMTTIAEGIETE 610
           GTGYSSL  L+ +  D +KIDRSF+  +  D +  AIV+ ++ + R L +  IAEG+E  
Sbjct: 574 GTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDT 633

Query: 611 EQYECVRRLGCDQVQGYLISRPLPAKEL 638
            +   +++LGC+Q QGYL  +PL A+E+
Sbjct: 634 SELAALKKLGCNQFQGYLFDKPLRAEEI 661