Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 330 a.a., sugar ABC transporter permease from Pseudomonas fluorescens SBW25-INTG

 Score =  172 bits (435), Expect = 1e-47
 Identities = 105/289 (36%), Positives = 159/289 (55%), Gaps = 5/289 (1%)

Query: 38  ILIFIANSLASPYFLNAWNLSDATFNFTEKAIIAFAMALLIIAGEIDLSVAAIIALASTA 97
           +++ +   LAS  FL A NLS+     +  AIIA  M  +I+ G IDLSV  ++AL+ T 
Sbjct: 39  VVVTVVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMALSGTL 98

Query: 98  MGAAVQMGVGTPGLVAIGIGT--GLFCGAFNGFLVAGLKLPSIVVTIGTMSLFRGISYMV 155
               +  G+  PGL AIG G   G+  G  NG  VA L +P I+VT+ TM + RG+  M 
Sbjct: 99  TAGLMVAGL-PPGL-AIGAGMLIGVAFGIGNGLFVAYLHMPPIIVTLATMGIARGLGLMY 156

Query: 156 LGDQAYGKYPADFAYFGQGYVFWVISFEFVLFIVMAVLFAILLHATNFGRQVYVIGTNPF 215
                    P  FA+FG+  +F +     ++ +     + +L H T  GR +Y IG N  
Sbjct: 157 TDGYPISGLPDWFAFFGRESLFGIQVPILIMLLTYLAAYVLLQH-TRIGRYIYAIGGNEE 215

Query: 216 AARFSGIPVERVKFILFLLTGLMSGIAAVCLTSRLGSTRPSIAQGWELEVVTMVVLGGVS 275
           A R SG+   R K +++ ++GL + IA + LTSRL S +P+    +EL+ +  VVLGG S
Sbjct: 216 AVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVSFELDAIAAVVLGGAS 275

Query: 276 ILGGSGTIAGVVIAAFVMGLVTFGLGLLNVPGIVMSIFVGLLLIITIAI 324
           I GG G I G ++ A ++G++  GL +L V   V S+  G ++++ I I
Sbjct: 276 IAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILLAIFI 324