Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 334 a.a., arabinose ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  170 bits (430), Expect = 5e-47
 Identities = 111/326 (34%), Positives = 167/326 (51%), Gaps = 8/326 (2%)

Query: 1   MSTNSQPSQAPRVIPDKLGTPLSRIMASWEVL----LLGVAILIFIANSLASPYFLNAWN 56
           M T S  S  P V    L    +R   +W+++    ++ V +++F A S   P FL++ N
Sbjct: 1   MQTPSTDSSTPAVASAGLSARAAR---TWDLINKSGIVMVFVILFAALSFTVPDFLSSRN 57

Query: 57  LSDATFNFTEKAIIAFAMALLIIAGEIDLSVAAIIALASTAMGAAVQMGVGTPGLVAIGI 116
           +     + T    I+  M  ++  GE+DLSVA+I+A A       +         VA G+
Sbjct: 58  IQGLLLSVTLIGSISVTMMFVLALGEVDLSVASIVAFAGVVASTLITATHSVILGVAAGV 117

Query: 117 GTGLFCGAFNGFLVAGLKLPSIVVTIGTMSLFRGISYMVLGDQAYGKYPADFAYFGQGYV 176
             G   G  NG LVA  K+ S++VT+  M + RG++Y+     A       F   G G  
Sbjct: 118 LAGGAVGLVNGVLVARYKINSLIVTLAMMEVVRGLAYITSNGDAVMISEERFFDLGGG-A 176

Query: 177 FWVISFEFVLFIVMAVLFAILLHATNFGRQVYVIGTNPFAARFSGIPVERVKFILFLLTG 236
           F  IS+     I+  VLF  LL  T FG+ V  +G N  AA  +G+PV R+K  +F+L G
Sbjct: 177 FLGISYPIWSNIIGFVLFGFLLKKTVFGKNVLAVGGNSEAALLAGLPVTRIKITVFVLQG 236

Query: 237 LMSGIAAVCLTSRLGSTRPSIAQGWELEVVTMVVLGGVSILGGSGTIAGVVIAAFVMGLV 296
           L++G A V L SR+    P  + G EL V++  VLGGVS+ GG  TI+GV++   +MG V
Sbjct: 237 LVTGFAGVMLASRMSLGDPKTSVGLELGVISACVLGGVSLTGGVATISGVLVGVLIMGSV 296

Query: 297 TFGLGLLNVPGIVMSIFVGLLLIITI 322
              + LLNVP     +  G +L++ +
Sbjct: 297 QDAMSLLNVPTFYQYLIRGGILLLAV 322