Pairwise Alignments

Query, 333 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

 Score =  162 bits (411), Expect = 8e-45
 Identities = 100/322 (31%), Positives = 162/322 (50%), Gaps = 15/322 (4%)

Query: 8   REWLLAGIIIIMIAGFALRAPGFGRPGNLVNIFNDTSILIILALGQMAVILTKSIDLSVA 67
           +E  +  ++ I++A   ++ P F    NL NI   +S+ +I+ALG   +I+T+  DLS  
Sbjct: 15  KEGAIYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAG 74

Query: 68  ANLAFTGMAVAM-------TNAAFPG---VPLPLLIVMAVGIGAFLGSLNGILVWWLGIP 117
             +    +  A         N  FP    +P+  +I+    IGA +G +NG++V +L + 
Sbjct: 75  RQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVT 134

Query: 118 PIVVTLGTLTIYRGM-AFVLSGGGWVNAHQFSPTFLNVPRTMI----LGMPVLSWVAILI 172
           P + TLGT+ I  G+ +      G      F   F    +  I         +++ AI+ 
Sbjct: 135 PFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIA 194

Query: 173 IAGAWLVLTRTSFGRSAYASGGNPGAAVYAGIDVGRTRFFAFVLSGALAGLASYLWVSRY 232
           I   W++  +T FG++ +A GGNP AA  +G++V  T    + LSG        L   R 
Sbjct: 195 IIFMWVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRI 254

Query: 233 AVAYVDIAAGFELDSVAANVIGGISIAGGIGSVAGAVLGALFLGVIKNALPVIGISPFAQ 292
             A  ++   +ELD++AA V+GG+S AGG+GS+AG V G L   VI   +  IG+SP+ Q
Sbjct: 255 GSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQ 314

Query: 293 MAISGVVIVLAVVFNARAEARK 314
             I G +I+ AV  ++   A K
Sbjct: 315 YIIKGSIIIFAVALDSMKYANK 336