Pairwise Alignments

Query, 333 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 320 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  191 bits (485), Expect = 2e-53
 Identities = 111/312 (35%), Positives = 177/312 (56%), Gaps = 5/312 (1%)

Query: 3   RLLKNREWLLAGIIIIMIAGFALRAPGFGRPGNLVNIFNDTSILIILALGQMAVILTKSI 62
           R LK    +   ++++ I  F+   P F    N +NI    +++ I A G   VIL   I
Sbjct: 13  RALKQYGGIFLSLVMLCIV-FSFFNPRFMTVVNFMNILQQVAVVAIAAFGMTWVILLGEI 71

Query: 63  DLSVAANLAFTGMAVAMTNAAFPGVPLPLLIVMAVGIGAFLGSLNGILVWWLGIPPIVVT 122
           DLSV + +A  GM  A   A   G+     I + +  GA +G LNG+L   L +P  +VT
Sbjct: 72  DLSVGSIIAVAGMVGAQCFAF--GMGFAPAIALTLAAGALMGMLNGVLTAKLLLPSFIVT 129

Query: 123 LGTLTIYRGMAFVLSGGGWVNAHQFSPTFLNVPRTMILGMPVLSWVAILIIAGAWLVLTR 182
           + T+ IYRGM  + + G    A   + T+  +     LG+P++ WV  ++     +VL++
Sbjct: 130 VATMGIYRGMVSLPTNGA--PAMIENETWTAIGTESFLGLPIIIWVVAVLFVINQIVLSK 187

Query: 183 TSFGRSAYASGGNPGAAVYAGIDVGRTRFFAFVLSGALAGLASYLWVSRYAVAYVDIAAG 242
           TSFGR AY +GGN  AAVY+GI V R +   F++SG +A ++  L  SR   A  +    
Sbjct: 188 TSFGRRAYLTGGNREAAVYSGIKVDRLKILIFMISGVMAAISGVLLSSRLFSAQTNAGMS 247

Query: 243 FELDSVAANVIGGISIAGGIGSVAGAVLGALFLGVIKNALPVIGISPFAQMAISGVVIVL 302
           +ELD++AA V+GG S+AGG+G++ G ++GAL +GV+ N + ++ +  F Q+ + G+VI++
Sbjct: 248 YELDAIAAAVLGGTSLAGGVGTMVGTLIGALIIGVMNNGMNMLSVPYFYQLIVKGLVILV 307

Query: 303 AVVFNARAEARK 314
           AV  + RA+  K
Sbjct: 308 AVWLDVRAKQAK 319