Pairwise Alignments

Query, 333 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 338 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  167 bits (422), Expect = 5e-46
 Identities = 99/281 (35%), Positives = 156/281 (55%), Gaps = 10/281 (3%)

Query: 35  NLVNIFNDTSILIILALGQMAVILTKSIDLSVAANLAFTGMAVAMTNAAFPGV------- 87
           NL+ I +  S+  +LA+G   V+++  IDLSV + LAF+GM  A       GV       
Sbjct: 53  NLMLILHQISVNGVLAVGMTFVVISAGIDLSVGSVLAFSGMMAASMATRSVGVTPWSDTY 112

Query: 88  PLPLLIVMAVGIGAFLGSLNGILVWWLGIPPIVVTLGTLTIYRGMAFVLSGGGWVNAHQF 147
           P+   I+ A+G+GA  G L+G ++    I   + TLG L   RG    ++GG  ++    
Sbjct: 113 PVIFPIIAALGVGALCGGLSGWIIARFRIQAFIATLGMLLAARGFTMSVTGGNPISG--L 170

Query: 148 SPTFLNVPRTMILGM-PVLSWVAILIIAGAWLVLTRTSFGRSAYASGGNPGAAVYAGIDV 206
           SP F       +  + PV   +  L+   AW++L +T FGR  YA GGN  +A  +GI+ 
Sbjct: 171 SPDFRWFGTGKLFEVIPVPVVILALVFLLAWVILNKTVFGRYVYAVGGNEKSARTSGINT 230

Query: 207 GRTRFFAFVLSGALAGLASYLWVSRYAVAYVDIAAGFELDSVAANVIGGISIAGGIGSVA 266
           G    + +V++G LAG+A  +  ++   A     + +ELD++AA VIGG S+AGG+G + 
Sbjct: 231 GAILIWVYVVAGFLAGVAGVILTAKTGSAQTSAGSSYELDAIAAVVIGGASLAGGVGRLT 290

Query: 267 GAVLGALFLGVIKNALPVIGISPFAQMAISGVVIVLAVVFN 307
           G   GAL +GV+ N L ++G+  F Q+ I G +IV+AV+ +
Sbjct: 291 GTFFGALIIGVMNNGLDILGVQSFYQLIIKGGLIVVAVILD 331