Pairwise Alignments

Query, 333 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 335 a.a., L-arabinose ABC transporter permease AraH from Ralstonia sp. UNC404CL21Col

 Score =  161 bits (408), Expect = 2e-44
 Identities = 95/302 (31%), Positives = 163/302 (53%), Gaps = 5/302 (1%)

Query: 15  IIIIMIAGFALRAPGFGRPGNLVNIFNDTSILIILALGQMAVILTKSIDLSVAANLAFTG 74
           I  I+ A  +     F    N+V +    S + ++A   M  + ++  DLS+ + +AF G
Sbjct: 38  IFAILFAALSFSVEYFFSWQNMVGLALSVSQIGMVACTMMFCLASRDFDLSIGSTVAFAG 97

Query: 75  MAVAMTNAAFPGVPLPLLIVMAVGIGAFLGSLNGILVWWLGIPPIVVTLGTLTIYRGMAF 134
           +  AM   A   + L   I  ++  GA +G +NG ++  L I  ++ TL T+ I RG+AF
Sbjct: 98  VLCAMIINATGSIALG--IGASLVAGAIIGGINGFVIAKLKINALITTLATMEIVRGLAF 155

Query: 135 VLSGGGWVNAHQFSPTFLNVPRTMILGMPVLSWVAILIIAGAWLVLTRTSFGRSAYASGG 194
           + S G  V        F ++  T+  G+P   WVA L      ++L +T +GR+  A GG
Sbjct: 156 IASHGQAVGVSDMD--FFDLGNTIFFGVPTPVWVAALCFVVFGVLLNKTIYGRNTLAIGG 213

Query: 195 NPGAAVYAGIDVGRTRFFAFVLSGALAGLASYLWVSRYAVAYVDIAAGFELDSVAANVIG 254
           NP AA  AG++V  TR   F++ G +A LA  +  +R      + A GFEL+ ++A V+G
Sbjct: 214 NPEAARLAGVNVNMTRIVIFLIQGVIAALAGVILAARITSGQPNAAQGFELNVISACVLG 273

Query: 255 GISIAGGIGSVAGAVLGALFLGVIKNALPVIGISPFAQMAISGVVIVLAVVFNARAEARK 314
           G+S+ GG  +++G ++G L +G ++NA+ ++ I  F Q  + G +++ AV+ + + + R 
Sbjct: 274 GVSLLGGRATISGVLVGVLIMGTVQNAMNLLNIDAFYQYLVRGAILLAAVLVD-QLKNRG 332

Query: 315 GR 316
           GR
Sbjct: 333 GR 334