Pairwise Alignments
Query, 510 a.a., ABC transporter permease from Agrobacterium fabrum C58
Subject, 504 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Score = 377 bits (969), Expect = e-109
Identities = 198/489 (40%), Positives = 312/489 (63%), Gaps = 6/489 (1%)
Query: 17 TPVLEMRGISQIFPGVKALDGVDIALYPGKVTALIGENGAGKSTLVKILTGIYRPNEGEI 76
T + ++ IS+ F G+ AL V+ + PG+V AL+GENGAGKSTL+++L G P++GE+
Sbjct: 3 TELANLKSISKSFGGIHALRSVNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQGEV 62
Query: 77 LLDGKAVHFHSAQDAIDAGVTAIHQETVLFDELSVGENIFLGHAPKGRFGLIDWKTINER 136
+++GK +DA G+ IHQE L +LSV ENIFLG P LI ++ R
Sbjct: 63 VINGKRTELRDPRDARALGIVVIHQELALAPDLSVAENIFLGELPT----LISRFSLRRR 118
Query: 137 ARILLEQLESTIDPTIRLKDLSIAQRHLVAIARALSVEARIVIMDEPTAALSRKEIDDLF 196
A+ L+++L IDP + LS+A + +V IA+ALS + +I++ DEPTA L ++ L
Sbjct: 119 AKQLIDRLGFDIDPGRLVGTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKLH 178
Query: 197 RIVENLKRQGKAILFISHKFDEVYEIAENYAVFRDGKMVGAGTLATTPQDEIVRLMVGRD 256
+I+ L+ +G I++ISH+ DEV++IA+ V +DG+ VG D+I+R+MVGR
Sbjct: 179 QIIRGLRDRGVGIVYISHRLDEVFDIADRMTVMKDGETVGTVATTDVKIDDIIRMMVGRP 238
Query: 257 VTNAFPKQAV-TLGPTVLSVRDYSHQTEFRDISLDLRKGEILGLYGLIGAGRSELCQSLF 315
+ N FP+++ T+G +L+V+ + RD+S +R GEI+GL GLIG+GR+E+ +++F
Sbjct: 239 IANMFPERSQRTIGAELLNVKKLNAGRMVRDVSFSVRAGEIVGLGGLIGSGRTEVARAIF 298
Query: 316 GITRPASGEVTLDGQPLTIRSPEDAIRAGIVYVPEERGRHGLALDMPIYQNMSLPSLTRT 375
G SG ++L G+ L ++SP DA++AGI VPE+R HG+ +D PI N ++ ++
Sbjct: 299 GADPLDSGTISLKGKALKLKSPRDAVKAGIGLVPEDRKEHGVVIDKPIRVNATMARMSSV 358
Query: 376 -SRKGFLTAANEFALARKYAARLDLRAAALSVPVGTLSGGNQQKVVIGKWLATKPKVIIL 434
+ GFL A E L L+A+++ PV +LSGGNQQKVV+ KW VIIL
Sbjct: 359 VNALGFLKPALERTDVTALGKSLRLKASSIDAPVSSLSGGNQQKVVLAKWFHAGGDVIIL 418
Query: 435 DEPTKGIDIGSKAAVHGFISELAAEGLSIIMISSELPEILGMSDRAIVMREGLMAGQFER 494
DEPT+G+D+G+KA ++ I++LA +G ++++ISSE E+ G+ DR + M +G + G+
Sbjct: 419 DEPTRGVDVGAKAEIYALINKLAEDGKAVLVISSEHQELFGLCDRVLAMGQGQIRGELTP 478
Query: 495 AEFSPEKLV 503
+ +S E L+
Sbjct: 479 SNYSEENLL 487
Score = 105 bits (262), Expect = 4e-27
Identities = 72/226 (31%), Positives = 111/226 (49%), Gaps = 13/226 (5%)
Query: 285 RDISLDLRKGEILGLYGLIGAGRSELCQSLFGITRPASGEVTLDGQPLTIRSPEDAIRAG 344
R ++ D+R GE+ L G GAG+S L + L G P+ GEV ++G+ +R P DA G
Sbjct: 22 RSVNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQGEVVINGKRTELRDPRDARALG 81
Query: 345 IVYVPEERGRHGLALDMPIYQNMSLPSLTRTSRKGFLTAANEFALARKYAARLDLRAAAL 404
IV + +E LA D+ + +N+ L L T + F+L R+ +D +
Sbjct: 82 IVVIHQELA---LAPDLSVAENIFLGELP--------TLISRFSLRRRAKQLIDRLGFDI 130
Query: 405 SVP--VGTLSGGNQQKVVIGKWLATKPKVIILDEPTKGIDIGSKAAVHGFISELAAEGLS 462
VGTLS +QQ V I K L+ K+I+ DEPT + +H I L G+
Sbjct: 131 DPGRLVGTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKLHQIIRGLRDRGVG 190
Query: 463 IIMISSELPEILGMSDRAIVMREGLMAGQFERAEFSPEKLVRAATG 508
I+ IS L E+ ++DR VM++G G + + ++R G
Sbjct: 191 IVYISHRLDEVFDIADRMTVMKDGETVGTVATTDVKIDDIIRMMVG 236
Score = 63.2 bits (152), Expect = 2e-14
Identities = 55/250 (22%), Positives = 110/250 (44%), Gaps = 15/250 (6%)
Query: 12 EASSPTPVLEMRGISQIFPGVKALDGVDIALYPGKVTALIGENGAGKSTLVKILTGIYRP 71
E S T E+ + ++ G D V ++ G++ L G G+G++ + + + G
Sbjct: 245 ERSQRTIGAELLNVKKLNAGRMVRD-VSFSVRAGEIVGLGGLIGSGRTEVARAIFGADPL 303
Query: 72 NEGEILLDGKAVHFHSAQDAIDAGVTAIHQE-----TVLFDELSVGENIFLGHAPKGRFG 126
+ G I L GKA+ S +DA+ AG+ + ++ V+ + V + + G
Sbjct: 304 DSGTISLKGKALKLKSPRDAVKAGIGLVPEDRKEHGVVIDKPIRVNATMARMSSVVNALG 363
Query: 127 LIDWKTINERARIL-----LEQLESTIDPTIRLKDLSIAQRHLVAIARALSVEARIVIMD 181
+ K ER + L S+ID + LS + V +A+ ++I+D
Sbjct: 364 FL--KPALERTDVTALGKSLRLKASSIDAPV--SSLSGGNQQKVVLAKWFHAGGDVIILD 419
Query: 182 EPTAALSRKEIDDLFRIVENLKRQGKAILFISHKFDEVYEIAENYAVFRDGKMVGAGTLA 241
EPT + +++ ++ L GKA+L IS + E++ + + G++ G T +
Sbjct: 420 EPTRGVDVGAKAEIYALINKLAEDGKAVLVISSEHQELFGLCDRVLAMGQGQIRGELTPS 479
Query: 242 TTPQDEIVRL 251
++ ++ L
Sbjct: 480 NYSEENLLGL 489