Pairwise Alignments
Query, 336 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58
Subject, 327 a.a., autoinducer 2 ABC transporter substrate-binding protein from Rahnella sp. WP5
Score = 124 bits (310), Expect = 4e-33 Identities = 104/315 (33%), Positives = 154/315 (48%), Gaps = 19/315 (6%) Query: 14 LSAALSVAGLGSIAEAAD-VKIALVVKSLGNGFFEAANKGAQ-EAAKDLGGVEIIYTGPT 71 L+ + A L A AAD +++ +VVK GN +F A G + EAAK G++ GPT Sbjct: 6 LACLFATAMLSLSAHAADKIRMGVVVKVGGNAWFNAMEAGIKSEAAKR--GIDAWQVGPT 63 Query: 72 STTAEGQIEVINSLIAQGVDAIAISANDPDAVVPALKKAAQRGIKVISWDSGVAPEGRI- 130 S Q+ I LIAQ VD I + ND + P LK+A GIKVI +S P+ + Sbjct: 64 SADPALQVRAIEDLIAQKVDVIGVVPNDARVLEPVLKRAHDAGIKVIVHES---PDQKYA 120 Query: 131 ---LQLNPSSNALIGKMCLQLAAAHLEGGKGDFAILSATTTSTNQNVWI-GEMKKQLKDF 186 ++ ++ I M +A A KGD+A+ + T W + Q + + Sbjct: 121 DWDFEMVDATQHGINHM---IALAQCMKEKGDYAVYVGSLTVPLHQKWADAAINYQKEHY 177 Query: 187 PGLNLVTTVYG-DDLADKSYREAQGLLSSQPNVKVIVAPTTVGVLAASQAVKDAGKIGQV 245 P ++LV +G + D S R L+S N+K I+A + G + A +AV + GK + Sbjct: 178 PDMHLVGDKFGVGESLDDSIRTTNDLMSKDANLKGILAIGSQGPIGAGRAVLNRGKTDDI 237 Query: 246 FVTGLGLPSEMAGAIKSGATKEFAIWNPIDLGYSATQIAYRLVKGEADGKPGSEIEAGRM 305 V G P + A +K+GA K IWNP+ G +IA +L KGE G IE M Sbjct: 238 CVFGPFSPGQGASLVKAGAIKGGFIWNPMVAGEVFVRIAEKLEKGEKI-TDGMTIEG--M 294 Query: 306 GKIKVGENSEAAMAD 320 GK+KV E + + + Sbjct: 295 GKVKVDEATHTILGN 309