Pairwise Alignments

Query, 308 a.a., hydroxymethylglutaryl-CoA lyase from Agrobacterium fabrum C58

Subject, 386 a.a., homocitrate synthase family protein from Methanococcus maripaludis S2

 Score = 46.6 bits (109), Expect = 9e-10
 Identities = 58/279 (20%), Positives = 109/279 (39%), Gaps = 39/279 (13%)

Query: 1   MDW----PRNVKI-------VEVGARDGLQNESAEVSTAIKIELIERLAAAGLPAVEAGA 49
           MDW    P N K+        +   RDG Q      +   K+E+ ++L    +  +EAG 
Sbjct: 1   MDWKAVSPYNPKLDLKDCYLYDTTLRDGEQTPGVCFAGDQKLEIAKKLDELKIKQIEAG- 59

Query: 50  FVSPRKVPQMADSREVFQGLKRWPGTAYAALVPNM-----KGFEAAIEAGVTEIAVFVSA 104
                  P ++++    + +K   G    A +  +     +  + AIE  V  I  F++ 
Sbjct: 60  ------FPIVSENER--KAIKSITGEGLNAQILALSRVLKEDIDKAIECDVDGIITFIAT 111

Query: 105 SDGFSRHNIGCSRAESLERLRDVAEAAADRNIRMRGYVSCIAGCPYDGAVAP-DDVAAMA 163
           S    ++ +  +  E  E      E A D  +        +A    D    P +D+  + 
Sbjct: 112 SPMHLKYKLHKNLDEVEEMGMKAVEYAKDHGL-------FVAFSAEDATRTPLEDIIRIH 164

Query: 164 EALVALGCYEISLGDTIGVGTAGQIRDVIERVATGIPRDQIAMHFHDTYGQGVANVLASL 223
           +     G   + + DT+G  T   +  +   ++  + +  I +H H+ +G  V N +  L
Sbjct: 165 KNAEEHGADRVHIADTLGCATPQAMYHICSELSKHLKKAHIGVHCHNDFGFAVINSIYGL 224

Query: 224 QEGIVVFDSSVAGLGGCPFAPGASGNVATEDVVYLLQGL 262
             G     ++V G+G        +GN A E++   L+ L
Sbjct: 225 IGGAKAVSTTVNGIG------ERAGNAAIEEIAMALKVL 257