Pairwise Alignments

Query, 308 a.a., hydroxymethylglutaryl-CoA lyase from Agrobacterium fabrum C58

Subject, 492 a.a., 2-isopropylmalate synthase from Methanococcus maripaludis JJ

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 29/307 (9%)

Query: 7   VKIVEVGARDGLQNESAEVSTAIKIELIERLAAAGLPAVEAGAFVSPRKVPQMADSREVF 66
           V I +   RDG Q     +S + K+EL  +L   G+  +EAG+ ++  K  + A      
Sbjct: 2   VNIFDTTLRDGEQTPGVSLSPSEKLELAIKLDELGVNIIEAGSAIT-SKGEREAMKLVTG 60

Query: 67  QGLKRWPGTAYAALVPNMKGFEAAIEAGVTEIAVFVSASDGFSRHNIGCSRAESLERLRD 126
           Q L     +   AL  ++   +AA+   V  + + V  SD    + +  SR E+L+    
Sbjct: 61  QNLNAEISSFVRALPVDI---DAALSCDVDSVHLVVPTSDIHMTYKLRKSREENLKDAMH 117

Query: 127 VAEAAADRNIRMRGYVSCIAGCPYDGAVAPDDVAAMAEALV---ALGCYEISLGDTIGVG 183
             E A D  +        I     + A    DV  + E  +    L    I + DT+G+ 
Sbjct: 118 AVEYAKDHGL--------IVELSAEDATR-SDVEFLKELFLKGEELKADRICVCDTVGIL 168

Query: 184 TAGQIRDVIERVATGIPRDQIAMHFHDTYGQGVANVLASLQEGIVVFDSSVAGLGGCPFA 243
           T  +  D+I+ +   I +  +++H H+ +G   AN ++++  G      ++ G+G     
Sbjct: 169 TPLKAIDLIKTMKNTI-KIPVSIHCHNDFGMATANTISAISAGADQCHVTINGIG----- 222

Query: 244 PGASGNVATEDVVYLLQGL-GIETGIDLMAVAKTGEWISRHLGRPNAARAGKALL---AA 299
              +GN + E+VV  L+ L  IETGID   + K    +S+++  P    A KAL+   A 
Sbjct: 223 -ERAGNASLEEVVMSLKSLYDIETGIDTEKLHKISRIVSKYMKIP--VPANKALVGDNAF 279

Query: 300 KQEGDLH 306
             E  +H
Sbjct: 280 AHEAGIH 286