Pairwise Alignments

Query, 210 a.a., RhtB family transporter from Agrobacterium fabrum C58

Subject, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

 Score =  114 bits (285), Expect = 1e-30
 Identities = 67/177 (37%), Positives = 98/177 (55%), Gaps = 9/177 (5%)

Query: 7   LAFAVVAFIGIATPGPTVLLALANGSKFGVRR---AMIGMAGAVLSDVVLIGAVALGLGA 63
           LA+ + A +    PG   + +++NG  +G R    A+IG+   +   +VL+G   +G+GA
Sbjct: 7   LAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVG---IGIGA 63

Query: 64  LLAASEFWFGVVKWVGVCYLVFLGIMLLRSRGMLGALGSTEENGAASARSIFLKSFLVAV 123
           L+A S   F ++KW+G  YLV+LGI   R R  L A  ++ E    S  ++  K+ L+ +
Sbjct: 64  LVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATTTSHE---LSQAALLRKAVLINL 120

Query: 124 TNPKGYLFFSAFLPQFIDPAAPQIQQYAVLALVFAGIDFIVMFGYALLGAQAVRVLR 180
           TNPK  +F  A  PQFIDP      Q+ VL +    ID IVMFGY  L AQ  R +R
Sbjct: 121 TNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIR 177