Pairwise Alignments

Query, 278 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  218 bits (554), Expect = 2e-61
 Identities = 123/271 (45%), Positives = 171/271 (63%), Gaps = 4/271 (1%)

Query: 5   ILDVENLRIRYG--GSATEAVRGISFTLGR-ERLGIVGESGSGKSTVGRALLRLLPSATI 61
           +LDV++LR+ +        AV  ++F+L + E LGIVGESGSGKS    A++ LL     
Sbjct: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGK 63

Query: 62  TADRLDFEGIDLLALSEKEMLKVRGRRMSMILQDPKFSLNPIRRVGDQVTETYLRHFKAS 121
                 FEG ++L L E+E+ KVR  +++MI QDP  SLNP  +V DQ+ E  + H    
Sbjct: 64  ITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGMG 123

Query: 122 KSQAREKALAMLDAVKIRDAERVYEQYPHEISGGMGQRVMIAMMLLADPDLVIADEPTSA 181
           K++A E+++ ML+AVKI +A +    YPHE SGGM QRVMIAM LL  P L+IADEPT+A
Sbjct: 124 KAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTA 183

Query: 182 LDVTVRLQVLNILDGLVRDRGIGLIMISHDLNLVRNFCDRVLIMYAGRVVETLAARDL-D 240
           LDVTV+ Q++ +L+ L R+    +IMI+HDL +V   CD+VL+MYAGR +E  +  D+  
Sbjct: 184 LDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIFY 243

Query: 241 QAQHPYTRGLLAAQPRIGGSRSPLAVLDRRP 271
              HPY  GLL+A PR+      L  +   P
Sbjct: 244 NPSHPYAEGLLSAIPRLDTEGEVLPTIPGNP 274