Pairwise Alignments

Query, 278 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  208 bits (529), Expect = 2e-58
 Identities = 125/262 (47%), Positives = 171/262 (65%), Gaps = 10/262 (3%)

Query: 4   PILDVENLRIRY--GGSATEAVRGISFTLGR-ERLGIVGESGSGKSTVGRALLRLL-PSA 59
           P+L VENL +R+  G + T  +  +SF LGR E LGI+GESG+GKSTVG A+L LL P  
Sbjct: 9   PLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSPEF 68

Query: 60  TITADRLDFEG--IDLLALSEKEMLKVRGRRMSMILQDPKFSLNPIRRVGDQVTETYLR- 116
             T+  ++F+G  ID +   E+E L  RGRR+S I QD   SL+P+  VG QV ET L  
Sbjct: 69  QQTSGTIEFDGKAIDGMTADERETL--RGRRISAIFQDHTASLDPLMSVGAQVEETCLAL 126

Query: 117 HFKASKSQAREKALAMLDAVKIRDAERVYEQYPHEISGGMGQRVMIAMMLLADPDLVIAD 176
               S+ +AR +A+ +L  V I + ER Y  YPH+ SGG  QRV+IA+ L   PD++IAD
Sbjct: 127 DSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIAD 186

Query: 177 EPTSALDVTVRLQVLNILDGLVRDRGIGLIMISHDLNLVRNFCDRVLIMYAGRVVET-LA 235
           EPTSALD TV+ QVL +L  LV + G+ +I+++HD+ ++    +RVL+M  G+VVE    
Sbjct: 187 EPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADRT 246

Query: 236 ARDLDQAQHPYTRGLLAAQPRI 257
              LDQ +H YT+ LLAA PR+
Sbjct: 247 TAILDQPRHDYTKKLLAAVPRL 268



 Score =  134 bits (337), Expect = 4e-36
 Identities = 84/244 (34%), Positives = 133/244 (54%), Gaps = 12/244 (4%)

Query: 17  GSATEAVRGISFTLGRERL-GIVGESGSGKSTVGRALLRL--LPSATITADRLDFEGIDL 73
           G     +R +   L R  + GIVGESGSGK+T GR L  L   P+  IT     F+    
Sbjct: 318 GKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRITIGEHPFD---- 373

Query: 74  LALSEKEMLKVRGRRMSMILQDPKFSLNPIRRVGDQVTETYLRHFKASKSQAREKALAML 133
             +S+         R+ MI QDP  SLNP   +G+ + E+     +    +      AM+
Sbjct: 374 --VSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGEEPADLAAMM 431

Query: 134 DAVKIRDAERVYEQYPHEISGGMGQRVMIAMMLLADPDLVIADEPTSALDVTVRLQVLNI 193
           D + +     +  ++PH++SGG  QRV IA  LLA P++++ADEPTSALDV+V+ +++ +
Sbjct: 432 DRLGL--PRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEIVQL 489

Query: 194 LDGLVRDRGIGLIMISHDLNLVRNFCDRVLIMYAGRVVETLAARDL-DQAQHPYTRGLLA 252
           L   + +R + ++ ISHDL +V+  C  V I   GR+ +      +  ++ +PYTR L+ 
Sbjct: 490 LKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRALIN 549

Query: 253 AQPR 256
           A+P+
Sbjct: 550 ARPQ 553