Pairwise Alignments

Query, 252 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  184 bits (467), Expect = 3e-51
 Identities = 103/234 (44%), Positives = 151/234 (64%), Gaps = 9/234 (3%)

Query: 22  KVLPSVSFRVEPGECFGLVGESGSGKSTVLRCVSMLNDFWTGDILIDGRSVRDIPLIERC 81
           + +  +S  ++ GE  G+VGESGSGKST+ R +  L    TG I   G+  R +   +R 
Sbjct: 301 EAVKGISLELKQGETLGIVGESGSGKSTLGRALIGLLPS-TGQIAFKGQDFRALSEKQRL 359

Query: 82  RM---LQMVFQDPYGSLHPRQSVRTVLSESLAIHKLG----DREERMRKVITDVGLPVSF 134
            +   +QMVFQDPYGSL PR +V  +++E L +H+      +R +R R+ + +V L  + 
Sbjct: 360 ALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNS 419

Query: 135 LDRFPHQLSGGQRQRVAIARALILEPSLLLLDEPTSALDVSVQAEILNLLQRLREERGFT 194
           ++R+PH+ SGGQRQR+AIARALILEPS +LLDEPTSALD SVQ  ++ LL+ +++ R   
Sbjct: 420 INRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIG 479

Query: 195 YIMVTHDLAVVDHMCDRFAVMLRGEITEILPREAIAGNGATHPYARELIGASLE 248
           Y+ ++HDLAVV  + DR  VM +G++ E    E+I  N   H Y ++LI AS +
Sbjct: 480 YLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHN-PQHEYTKKLIAASFD 532



 Score =  142 bits (359), Expect = 1e-38
 Identities = 86/255 (33%), Positives = 138/255 (54%), Gaps = 15/255 (5%)

Query: 5   VETRDLSITFGSGHTALKVLPSVSFRVEPGECFGLVGESGSGKSTVLRCVSML-----ND 59
           ++ R+LS++F +    +  + +VSF + PGE   +VGESGSGKS     +  L       
Sbjct: 7   LQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNARI 66

Query: 60  FWTGDILIDGRSVRDIPLIERCRM----LQMVFQDPYGSLHPRQSVRTVLSESLAIHKLG 115
                I+ +G  + +    +  R+    + M+FQ+P  SL+P   V   ++E++  H+  
Sbjct: 67  HPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRNV 126

Query: 116 DREERMRKVITDVGL-----PVSFLDRFPHQLSGGQRQRVAIARALILEPSLLLLDEPTS 170
            + +  ++V+    L     P     +FPH+ SGGQ QR+ IA ALI EP +L+ DEPT+
Sbjct: 127 SQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPTT 186

Query: 171 ALDVSVQAEILNLLQRLREERGFTYIMVTHDLAVVDHMCDRFAVMLRGEITEILPREAIA 230
           ALDV+VQAE+L L++ ++   G   + +THDL VV  + DR  VM +G++ E    E + 
Sbjct: 187 ALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQLF 246

Query: 231 GNGATHPYARELIGA 245
                H Y R LI +
Sbjct: 247 LQ-PEHDYTRMLINS 260