Pairwise Alignments

Query, 297 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 320 a.a., chaperon-like protein for quinone binding in photosystem II from Synechococcus elongatus PCC 7942

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 14/239 (5%)

Query: 5   ILVTGATGKLGQRVVNRLLQKQAKVRVLTR--RREDALKLWGDSVDIAEGNFSDPASLKG 62
           +LV GATG LG+++  R L +  +VR L R  +R + L+ WG   D+  G+ + P SL  
Sbjct: 3   VLVVGATGTLGRQIARRALDEGHRVRCLVRSPKRGNFLREWG--CDLVRGDLTQPESLTF 60

Query: 63  ASRDVDRVFLLSPIGKTLAADQNAV--------VDAALSAGVSQIVKLSGSDWTLKNAAR 114
           A   ++ V   +    T +     V        + AA  AGV + V  S  D   K+   
Sbjct: 61  ALEGIEAVIDAATTRSTDSLSCYDVDWQGKVNLIKAATEAGVQRFVFCSIID-AEKHRDV 119

Query: 115 SISGTAHAAVEKHLAETGIAHTVLRPNAWMQVALEPVVAALRNGEDVPARFGNAAVSFID 174
            +    +   E+ L ++G+ +T+LR   +MQ  +      +  G        +  ++++ 
Sbjct: 120 PLMDIKYCT-EEFLRQSGLNYTILRLAGFMQGLIAEFAIPVLEGRTAFITQDSDPIAYLS 178

Query: 175 ADDIADVAVEALSASAPPAGTLVLTGHEALAALGIARIAARILHRPVGVSHQSASTFPA 233
             DIA  AV AL+  A    TL + G +A + L I R+  R+  +   ++    +T  A
Sbjct: 179 TLDIARFAVAALTTPATEKQTLPVVGPKAWSGLEIFRLCERLSGKETKIARLPLATVSA 237