Pairwise Alignments

Query, 332 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  279 bits (713), Expect = 8e-80
 Identities = 148/320 (46%), Positives = 205/320 (64%), Gaps = 11/320 (3%)

Query: 1   MSKLIEVHDLSVSF----GSAQPVKGVSFDVSPGEMLAIVGESGSGKSLTALGLIGLLPS 56
           M  L++V DL V F    G    V  ++F +  GE L IVGESGSGKS T   ++GLL  
Sbjct: 1   MMSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAK 60

Query: 57  HAKTGGRVQLEGRDLLPLSERQWRGIRGRDIGMIFQEPMTSLNPVLTVGEQIIEVLRIHE 116
           + K  G  + EG+++L L ER+   +R   I MIFQ+PMTSLNP + V +Q++EVL +H+
Sbjct: 61  NGKITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHK 120

Query: 117 KIDRRQARKRAIELLDLVNIPDAARRVDDYPHQLSGGMRQRVMIAIGVACNPKLLIADEA 176
            + + +A + ++ +L+ V IP+A +R+  YPH+ SGGMRQRVMIA+ + C PKLLIADE 
Sbjct: 121 GMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP 180

Query: 177 TTALDVTIQAQILQLLDNLRRDLNMAVILITHDLGIVAQWADRVMVMYAGRKVEEGLPEP 236
           TTALDVT+QAQI++LL+ L+R+ N A+I+ITHDLG+VA   D+V+VMYAGR +E G    
Sbjct: 181 TTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240

Query: 237 VFSNPYHPYTRGLLAASPRAE-DGQHYRDGPLIEIPGSIVSATG-ERGCAFRPRCPSARG 294
           +F NP HPY  GLL+A PR + +G+      L  IPG+  +      GC ++ RC     
Sbjct: 241 IFYNPSHPYAEGLLSAIPRLDTEGE-----VLPTIPGNPPNLLRLPVGCPYQERCHRVTD 295

Query: 295 FCGQFVPPLRPISEGRYAAC 314
            C +  P L P    R  AC
Sbjct: 296 RCKREAPILLPFGNSRQRAC 315