Pairwise Alignments

Query, 332 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 321 a.a., oligopeptide ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  276 bits (706), Expect = 5e-79
 Identities = 155/307 (50%), Positives = 197/307 (64%), Gaps = 11/307 (3%)

Query: 4   LIEVHDLSVSF----GSAQPVKGVSFDVSPGEMLAIVGESGSGKSLTALGLIGLLPSHAK 59
           L+EV  L V F    G+   V+ VSF +  G  L IVGESG GKS+TAL L+GL+P+  +
Sbjct: 5   LLEVQGLDVVFDIEAGAIHAVRDVSFTLPHGRTLCIVGESGCGKSMTALALLGLVPAPGR 64

Query: 60  -TGGRVQLEGRDLLPLSERQWRGIRGRDIGMIFQEPMTSLNPVLTVGEQIIEVLRIHEKI 118
            T  R+Q +G DL  L E   R +RG  + M+FQ+PMTSLNPV  VG+Q+ E LR+H ++
Sbjct: 65  VTARRLQFDGHDLTALDENGLRALRGHHMAMVFQDPMTSLNPVFRVGDQVAEALRLHLRL 124

Query: 119 DRRQARKRAIELLDLVNIPDAARRVDDYPHQLSGGMRQRVMIAIGVACNPKLLIADEATT 178
             R AR+  IEL   V IP    R DDYPHQLSGGMRQRVMIA+ ++C P+LLIADE TT
Sbjct: 125 KGRAAREATIELFRQVGIPSPETRYDDYPHQLSGGMRQRVMIAMALSCGPRLLIADEPTT 184

Query: 179 ALDVTIQAQILQLLDNLRRDLNMAVILITHDLGIVAQWADRVMVMYAGRKVEEGLPEPVF 238
           ALDVTIQ QIL LL ++      +V+LITHDLG+VA+ AD V+VMYAG  VE    + +F
Sbjct: 185 ALDVTIQGQILGLLSDIAATGRASVLLITHDLGVVAETADDVIVMYAGAIVEHAPVQELF 244

Query: 239 SNPYHPYTRGLLAASPRAEDGQHYRDGPLIE-IPGSIVSATG-ERGCAFRPRCPSARGFC 296
           ++P HPYTRGL+ ++P      H    P +E I G++        GCAFR RC  A   C
Sbjct: 245 ASPLHPYTRGLMRSAPPV----HGERSPRLEAIRGNVPPLDDLPSGCAFRDRCEHAFERC 300

Query: 297 GQFVPPL 303
               PPL
Sbjct: 301 ATAAPPL 307