Pairwise Alignments

Query, 331 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 303 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  209 bits (532), Expect = 7e-59
 Identities = 109/272 (40%), Positives = 166/272 (61%), Gaps = 6/272 (2%)

Query: 60  FLTNPNAIVGLLFLATVLIAALIAPLIYPGDPLEMVARPFLWP-----GQNAAYPLGTDS 114
           F  N  A+ GLLF+  ++  AL AP + P DP E      L P     G    + LGTD 
Sbjct: 27  FSRNKGAVAGLLFMILIVFCALFAPWVAPHDPSEQYRDFLLTPPAWLEGGQIQFLLGTDE 86

Query: 115 MGRDVLAGIVHGARISLTVGVVATLIGLTIGISIGAFAGYFGGVIDDILVKLIEIFQTLP 174
           +GRD+L+ ++ G+R+SL +G+ + ++ L  GI +G FAG+F  ++   +++L++I   LP
Sbjct: 87  LGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRILGPTIMRLMDIMLALP 146

Query: 175 NFVLLVVLVAIAQPSVTTVTSAIGIITWPLVARLTRAEFRAIREKDYVLAARSLGYGHAR 234
           + +L V +VAI  P +     AI I++ P   RLTRA       +DYV AAR  G G  R
Sbjct: 147 SLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPR 206

Query: 235 IVFQEILPNALPPIIVTSSVMVAGAILMEAALSFMGLG-DPNRVSWGSMIGSGRDVIRTA 293
           ++F  +LPN + P+IV +++  + AIL  AAL F+GLG  P    WG+M+ S RD I  A
Sbjct: 207 LMFITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERA 266

Query: 294 WYLTALPGLAIVFTVISLNLISDGLNDALNPR 325
           W++ +LPGL I+ +V+++NL+ DGL DAL+P+
Sbjct: 267 WWVVSLPGLTILLSVLAINLMGDGLRDALDPK 298