Pairwise Alignments

Query, 314 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 413 a.a., Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme from Pseudomonas fluorescens FW300-N1B4

 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 65/296 (21%), Positives = 113/296 (38%), Gaps = 49/296 (16%)

Query: 46  RIARSGLLALSVPTDMGGADITNDVLSQALSIIAAANAGAAHDLVEHFTALEFIRNAGSD 105
           +  RSGL ++S+P + GG  ++   L+   +II+AA+          F  L  I  + ++
Sbjct: 62  QFTRSGLGSISIPREYGGPQVSFVTLASVFAIISAADPALGQIPQNQFGILNLILGSATE 121

Query: 106 EQRRALFARLDLGETFALATSDGG------LDQAIPVTTDDYALRLPDDIALLARANADW 159
            Q++ LF  +  G     A  + G      L   I    D + +             A W
Sbjct: 122 SQKKQLFKSVLEGWRIGNAGPERGTKNTLELKARISADGDGFVIN-GQKFYSTGALFAHW 180

Query: 160 IVVPAVNTSG-QPLLVVLRNRPNI----SWEGL----------------LRANQVV--FL 196
           + V A+N  G Q L  V R  P +     W G                 + A  VV  + 
Sbjct: 181 VAVKALNDDGKQVLAFVRRGTPGLRIVDDWSGFGQRTTASGTILLNNVRVDAELVVDNWK 240

Query: 197 AQGAENLAASVSTLLKAAVALG--------------QKQRELSGLLIDRLADDGAAKPVI 242
              + N   +VS L++AA+  G              ++ R      +DR +DD      I
Sbjct: 241 INDSPNTQGAVSQLIQAAIDAGIARGAIDDAIEFVQKRARPWIDAKVDRASDDLYVIADI 300

Query: 243 GEIFLAIELLKAQISSLATHIDAAQVGAENVTCRSVRNNAITL---EILMARLGLI 295
           G++ + +   +A +      +D  QV A  +T  S    +I +   ++L   + L+
Sbjct: 301 GKLKIELHAAEALLRKAGQVLD--QVNAAPLTAESAARASIAVAEAKVLTTEISLL 354