Pairwise Alignments
Query, 551 a.a., ABC transporter permease from Agrobacterium fabrum C58
Subject, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Score = 335 bits (860), Expect = 2e-96
Identities = 194/511 (37%), Positives = 294/511 (57%), Gaps = 9/511 (1%)
Query: 18 SGRRIQIIRGVDIDIAEGEIVALIGESGSGKTTIALTLMGYARPG-CRISGGSVTVAGRD 76
+G+ + GV + IA GE +AL+GESGSGK+ A ++ G GS+ D
Sbjct: 18 AGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHYLSGSIHFGDVD 77
Query: 77 MVQLSEMERAKIRGTKISYVPQSAAAAFNPAQKIIDQVIEVTRIHDLMPPQEARRRAVEL 136
++ SE IRG +I + Q + NP KI Q++E IH + A ++A+E
Sbjct: 78 TLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKAIEW 137
Query: 137 FKALSLPNPETIGERYPHQVSGGQLQRLSAAMALIGNPELVIFDEPTTALDVTTQIEVLR 196
+ + +PE YPH++SGG+ QR+ AMALI PEL+I DEPTTALDV+ Q ++L
Sbjct: 138 LGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQILD 197
Query: 197 AFKSAMRKGGIGGVYVSHDLAVVAQIADRIVVLKGGEIQETGTTTDILENAQHPYTRELL 256
KS ++ G+ ++++HDL++V +IADR+ V++ G++ ET + HPYT++L+
Sbjct: 198 LLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQQLI 257
Query: 257 TAFNDKVRTVAPLKQNGAKPLLDIEKLIAGYGTKGD---DHMPLVRAVDSVSLAVYPGRN 313
N R V A LL EKL + KG ++AV +S + G++
Sbjct: 258 ---NADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQS 314
Query: 314 LGIIGESGCGKSTLARAIAGILPAASGHVIFEGRQLDADARRRTSDQLRRMQIVFQYADT 373
LG++GESG GKST AI +L A+ G + F G+ L A RR +MQ+VFQ +
Sbjct: 315 LGLVGESGSGKSTTGMAILKLL-ASQGAIRFAGQDLQALKRREMLPYRSKMQVVFQDPYS 373
Query: 374 ALNPAKSIEDILGRPLAFYHSLKGKARDARIDQLLDMVKLPRSVRHRHPSGLSGGQKQRV 433
ALNP S+ ++G L + L D I ++ V L RHR+P+ SGGQ+QR+
Sbjct: 374 ALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRI 433
Query: 434 NFARALAAEPSLIICDEITSALDTVVAAAIIDLLGELQRELNLSYIFISHDLSVVESICD 493
ARAL +P I+ DE TS+LD V A ++DLL +LQ++ L+Y+FISHDL+V+ ++C
Sbjct: 434 AIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCH 493
Query: 494 EIVVMYGGQKVEHLETDAI-KSPTHPYSKLL 523
+VM G+ VEH ET ++ ++P+HPY++ L
Sbjct: 494 HTIVMKAGEIVEHGETQSLFENPSHPYTQQL 524
Score = 149 bits (375), Expect = 3e-40
Identities = 97/262 (37%), Positives = 138/262 (52%), Gaps = 13/262 (4%)
Query: 277 LLDIEKLIAGYGTKGDDHMPLVRAVDSVSLAVYPGRNLGIIGESGCGKSTLARAIAGILP 336
+L I+ L G+G G + VSL + G L ++GESG GKS A AI +LP
Sbjct: 5 VLKIDNLSVGFGIAGQARP----VTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60
Query: 337 AASGHVIFEGRQL-DADARRRTSDQLR-----RMQIVFQYADTALNPAKSIEDILGRPLA 390
S H + D D R + LR R+ ++FQ +LNP I L LA
Sbjct: 61 KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120
Query: 391 FYHSLKGKARDARIDQLLDMVKL--PRSVRHRHPSGLSGGQKQRVNFARALAAEPSLIIC 448
+ L+ A + + + L V + P + +P LSGG++QRV A AL EP L+I
Sbjct: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180
Query: 449 DEITSALDTVVAAAIIDLLGELQRELNLSYIFISHDLSVVESICDEIVVMYGGQKVEHLE 508
DE T+ALD V A I+DLL LQ+EL ++ +FI+HDLS+V I D + VM GQ VE
Sbjct: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240
Query: 509 TDAI-KSPTHPYSKLLFSSVPK 529
+ +P HPY++ L ++ P+
Sbjct: 241 CHTLFAAPAHPYTQQLINADPR 262
Score = 139 bits (350), Expect = 3e-37
Identities = 78/235 (33%), Positives = 127/235 (54%), Gaps = 8/235 (3%)
Query: 22 IQIIRGVDIDIAEGEIVALIGESGSGKTTIALTLMGYARPGCRISGGSVTVAGRDMVQLS 81
I+ + + +A+G+ + L+GESGSGK+T + ++ S G++ AG+D+ L
Sbjct: 299 IKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLA-----SQGAIRFAGQDLQALK 353
Query: 82 EMERAKIRGTKISYVPQSAAAAFNPAQKIIDQVIEVTRIHDLMPPQEARRRAVELFKALS 141
E R +K+ V Q +A NP + + E R+H + E + + +
Sbjct: 354 RREMLPYR-SKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVG 412
Query: 142 LPNPETIGERYPHQVSGGQLQRLSAAMALIGNPELVIFDEPTTALDVTTQIEVLRAFKSA 201
L RYP++ SGGQ QR++ A AL+ PE ++ DEPT++LD T Q +VL K
Sbjct: 413 LDVDTR--HRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDL 470
Query: 202 MRKGGIGGVYVSHDLAVVAQIADRIVVLKGGEIQETGTTTDILENAQHPYTRELL 256
+K + +++SHDLAV+ + +V+K GEI E G T + EN HPYT++L+
Sbjct: 471 QQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525