Pairwise Alignments

Query, 551 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 567 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  362 bits (929), Expect = e-104
 Identities = 203/542 (37%), Positives = 304/542 (56%), Gaps = 13/542 (2%)

Query: 3   NLVEIRGLKVEATTDSGRRIQIIRGVDIDIAEGEIVALIGESGSGKTTIALTLMGYARPG 62
           +++ +R L V+A      R  ++ G+ +D+A+GEI+ L+GESGSGK+     L+      
Sbjct: 4   SVLSVRDLTVKAHLQGETRT-LLDGISLDLAKGEILGLVGESGSGKSLFCRALVRLLPSS 62

Query: 63  C-RISGGSVTVAGRDMVQLSEMERAKIRGTKISYVPQSAAAAFNPAQKIIDQVIEVTRIH 121
             +I GG+V + GRD+  +++ E  ++RG +I  + Q+  +  +P  +I DQ+ E  R H
Sbjct: 63  LLKIEGGAVLLGGRDLTAVTDAEMLEVRGAEIGMIFQNPTSHLDPVMRIGDQIAEGIRYH 122

Query: 122 DLMPPQEARRRAVELFKALSLPNPETIGERYPHQVSGGQLQRLSAAMALIGNPELVIFDE 181
             +  ++AR  AVE+   +  P P    + YPH++SGG  QR    +AL  NP+++I DE
Sbjct: 123 QGLGGRDARAAAVEILGQIGFPEPVRQYDSYPHELSGGMRQRAMIGVALSCNPQILIADE 182

Query: 182 PTTALDVTTQIEVLRAFKSAMRKGGIGGVYVSHDLAVVAQIADRIVVLKGGEIQETGTTT 241
           PTTALDVT Q ++L+       + G+  + ++HDL +VAQ  DRI V++GG++ E G   
Sbjct: 183 PTTALDVTIQAQILKLLMDIRDRRGLSIILITHDLGIVAQTCDRIAVMRGGKLLEQGPKR 242

Query: 242 DILENAQHPYTRELLTAFNDKVRTVAPL------KQNGAKPLLDIEKLIAGYGTKGD--- 292
            IL   Q PYT  L+ +       V P            + LL+I+ L   + + G    
Sbjct: 243 TILSAPQDPYTVRLIHSHPSMPEAVLPATSLPAPSHGATRSLLEIDDLHVRFPSGGSLFR 302

Query: 293 -DHMPLVRAVDSVSLAVYPGRNLGIIGESGCGKSTLARAIAGILPAASGHVIFEGRQLDA 351
             +   V AV  +SL + PG  +GI+GESG GKSTLARA+ G+ P ++GHV F+G  L  
Sbjct: 303 GKNARAVSAVSGISLRIMPGETVGIVGESGSGKSTLARAMLGLTPISAGHVSFDGIDLSQ 362

Query: 352 DARRRTSDQLRRMQIVFQYADTALNPAKSIEDILGRPLAFYHSLKGKARDARIDQLLDMV 411
                 +       +VFQ    ALNP  +I   L   L     + G    ARI +LLD+V
Sbjct: 363 QRGAGLTRLRHESAMVFQDPFNALNPRLTIGQTLAEVLKVQKKIGGADIPARIGELLDLV 422

Query: 412 KLPRSVRHRHPSGLSGGQKQRVNFARALAAEPSLIICDEITSALDTVVAAAIIDLLGELQ 471
            L R   HR P  +SGGQ QR   ARALA +P LII DE  +ALD  + A I+DL  +L 
Sbjct: 423 GLEREFAHRKPRSMSGGQCQRAGIARALAVDPRLIIADECVAALDVTIQAQIVDLFRKLA 482

Query: 472 RELNLSYIFISHDLSVVESICDEIVVMYGGQKVEH-LETDAIKSPTHPYSKLLFSSVPKL 530
           R+LNL+ IFI+HDL++V ++C+  VVM+ G+ +E     D    P HPY+  L +++P +
Sbjct: 483 RDLNLTLIFIAHDLAIVRNLCERTVVMHRGEIIEEGRSEDVFSRPKHPYTAALIAAIPDI 542

Query: 531 DP 532
           DP
Sbjct: 543 DP 544



 Score =  131 bits (329), Expect = 8e-35
 Identities = 85/266 (31%), Positives = 131/266 (49%), Gaps = 7/266 (2%)

Query: 18  SGRRIQIIRGVDIDIAEGEIVALIGESGSGKTTIALTLMGYARPGCRISGGSVTVAGRDM 77
           + R +  + G+ + I  GE V ++GESGSGK+T+A  ++G       IS G V+  G D+
Sbjct: 305 NARAVSAVSGISLRIMPGETVGIVGESGSGKSTLARAMLGLTP----ISAGHVSFDGIDL 360

Query: 78  VQLSEMERAKIRGTKISYVPQSAAAAFNPAQKIIDQVIEVTRIHDLMPPQEARRRAVELF 137
            Q       ++R    + V Q    A NP   I   + EV ++   +   +   R  EL 
Sbjct: 361 SQQRGAGLTRLRHES-AMVFQDPFNALNPRLTIGQTLAEVLKVQKKIGGADIPARIGELL 419

Query: 138 KALSLPNPETIGERYPHQVSGGQLQRLSAAMALIGNPELVIFDEPTTALDVTTQIEVLRA 197
             + L        R P  +SGGQ QR   A AL  +P L+I DE   ALDVT Q +++  
Sbjct: 420 DLVGLERE--FAHRKPRSMSGGQCQRAGIARALAVDPRLIIADECVAALDVTIQAQIVDL 477

Query: 198 FKSAMRKGGIGGVYVSHDLAVVAQIADRIVVLKGGEIQETGTTTDILENAQHPYTRELLT 257
           F+   R   +  ++++HDLA+V  + +R VV+  GEI E G + D+    +HPYT  L+ 
Sbjct: 478 FRKLARDLNLTLIFIAHDLAIVRNLCERTVVMHRGEIIEEGRSEDVFSRPKHPYTAALIA 537

Query: 258 AFNDKVRTVAPLKQNGAKPLLDIEKL 283
           A  D     + L    A P+  I+ +
Sbjct: 538 AIPDIDPDRSLLGHTDAPPVEPIQSV 563