Pairwise Alignments

Query, 551 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  318 bits (816), Expect = 3e-91
 Identities = 193/537 (35%), Positives = 292/537 (54%), Gaps = 18/537 (3%)

Query: 1   MTNLVEIRGLKVEATTDSGRRIQIIRGVDIDIAEGEIVALIGESGSGKTTIALTLMGYAR 60
           M  L+ + GL +E         Q+++ V  D+A GEI  ++GESGSGKT     L+    
Sbjct: 3   MDKLLTVCGLSLEVARTGQ---QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLP 59

Query: 61  PGCRISGGSVTVAGRDMVQLSEMERAKIRGTKISYVPQSAAAAFNPAQKIIDQVIEVTRI 120
           P  +++ GSV+  GRD++++ E E   +RG +I  V Q    + NP+  I  Q+ E   +
Sbjct: 60  PTIKVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLIL 119

Query: 121 HDLMPPQEARRRAVELFKALSLPNPETIGERYPHQVSGGQLQRLSAAMALIGNPELVIFD 180
           H     QE R   +++ K + + +PE     YPH+ SGG  QR+  A  ++  P L+I D
Sbjct: 120 HTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIAD 179

Query: 181 EPTTALDVTTQIEVLRAFKSAMRKGGIGGVYVSHDLAVVAQIADRIVVLKGGEIQETGTT 240
           EPTTALD   Q +V+       R  G   + +SHDL +VA+   RIVV++ G I E G T
Sbjct: 180 EPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRT 239

Query: 241 TDILENAQHPYTRELLTA--FNDKVRTVAPLKQNGAKPLLDIEKLIAGYGTKGD---DHM 295
            D+L+  QHPYT++LL++  F  + R +       + P++    +I  Y  +      + 
Sbjct: 240 EDLLKAPQHPYTKKLLSSLPFRGRPRQI----DLTSVPMISARDIIVDYAGRKSLFRKNK 295

Query: 296 PLVRAVDSVSLAVYPGRNLGIIGESGCGKSTLARAIAGILPAASGHVIFEGRQLDADARR 355
           P  RA+  VS+ ++ G  + ++G SG GK+TL R IAG++  + G + F+GR        
Sbjct: 296 P-KRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGR----PRTE 350

Query: 356 RTSDQLRRMQIVFQYADTALNPAKSIEDILGRPLAFYHSLKGKARDARIDQLLDMVKLPR 415
             +D     Q+VFQ   ++L+P  +IE ++   L     L GKA+  R  + L+ V L  
Sbjct: 351 NWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGV 410

Query: 416 SVRHRHPSGLSGGQKQRVNFARALAAEPSLIICDEITSALDTVVAAAIIDLLGELQRELN 475
               R+P  LSGGQ+QRV  ARA+A  P  +I DE  SALD  V A ++DL  +LQ+   
Sbjct: 411 DYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYG 470

Query: 476 LSYIFISHDLSVVESICDEIVVMYGGQKVEHLETDAI-KSPTHPYSKLLFSSVPKLD 531
            S +FISHDL VVE + D +VVM  G+ +E  + D I  SP   Y++ L S++P LD
Sbjct: 471 FSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPALD 527