Pairwise Alignments

Query, 551 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  339 bits (869), Expect = 2e-97
 Identities = 199/533 (37%), Positives = 304/533 (57%), Gaps = 15/533 (2%)

Query: 3   NLVEIRGLKVEATTDSGRRIQIIRGVDIDIAEGEIVALIGESGSGKTTIALTLMGYA-RP 61
           +L+E+R L VE  T +G  +  ++ +   + +GE +A++GESGSGK+  +  +M     P
Sbjct: 4   HLLEVRNLSVEFHTAAGV-VHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMP 62

Query: 62  GCRISGGSVTVAGRDMVQLSEMERAKIRGTKISYVPQSAAAAFNPAQKIIDQVIEVTRIH 121
             RIS G + + GRD++ +   ER ++ G +++ + Q   +  NP   +  Q+ E    H
Sbjct: 63  PGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTH 122

Query: 122 DLMPPQEARRRAVELFKALSLPNPETIGERYPHQVSGGQLQRLSAAMALIGNPELVIFDE 181
            L    +AR  A+ L + + +P PE    +YPH+ SGGQ QR+  AMAL   P+L+I DE
Sbjct: 123 GLAG-SKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADE 181

Query: 182 PTTALDVTTQIEVLRAFKSAMRKGGIGGVYVSHDLAVVAQIADRIVVLKGGEIQETGTTT 241
           PTTALDVT Q EVL+  K   R+ G+  + ++HDL VV++IADR+VV++ G I E GT  
Sbjct: 182 PTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVR 241

Query: 242 DILENAQHPYTRELLTAFNDKVRTVAPLKQNGAKPLLDIEKLIAGYGTKGDDHMPLVRAV 301
           +I +N QHPYT++L+ A   K     P  +  A+PLL +  +   YG+          A+
Sbjct: 242 EIYKNPQHPYTQKLIAAAPGKGAMHEPGAR--AEPLLSVRDVRKTYGS--------FEAL 291

Query: 302 DSVSLAVYPGRNLGIIGESGCGKSTLARAIAGILPAASGHVIFEGRQLDADARRRTSDQL 361
             +S  + PG  + ++GESG GKSTLARA+  +    SG  +++GR L A +        
Sbjct: 292 KGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELYKLR 351

Query: 362 RRMQIVFQYADTALNPAKSIEDILGRPLAFYHSLKGKAR-DARIDQLLDMVKLPRSVRHR 420
           R +Q+VFQ    +LNP  ++  ++      +  +  KA+   R+ +LL  V L      R
Sbjct: 352 RDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHMSR 411

Query: 421 HPSGLSGGQKQRVNFARALAAEPSLIICDEITSALDTVVAAAIIDLLGELQRELNLSYIF 480
           +P   SGGQ+QR+  ARALA EP LIICDE  SALD  V A +I+LL  L+RE+ +++IF
Sbjct: 412 YPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAFIF 471

Query: 481 ISHDLSVVESICDEIVVMYGGQKVE-HLETDAIKSPTHPYSKLLFSSVPKLDP 532
           I+HDL VV    D ++VM  G+ VE     +   +P   Y++ L ++    DP
Sbjct: 472 IAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAASLSPDP 524