Pairwise Alignments

Query, 283 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (337), Expect = 2e-36
 Identities = 83/284 (29%), Positives = 147/284 (51%), Gaps = 11/284 (3%)

Query: 3   DHLKTYSGTSRLGYKINAVGIFAFLVIFIWAMVAIFAPYLIPYPVGDIVDLDYFGPM--- 59
           +H+ T        ++ N + +F    +   A+V I +P++ PY       +    P    
Sbjct: 10  EHIPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHSSVLLLPPSWEP 69

Query: 60  --TSDLWLGSDYLGRDVFSRILMGARFTVGISLAAVTIACVSGVVLGMCAAVVGGWFDAM 117
             T D +LG+D LGRD+ SR++ G+ F++G ++    IA + G  +G  A +  G   + 
Sbjct: 70  EGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSST 129

Query: 118 LSRFLDAVNSIPSKLFGLVVVAAVGSSIPVLIVTLSVIYTPGAYRFARALAVNVNT---M 174
           L+  LD V SIPS L  ++ VA +G+    +++ + +   P   RF R++ V V+     
Sbjct: 130 LNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIP---RFIRSVYVAVHNEVEK 186

Query: 175 DFVTVARVRGESLLYLISSEILPNIIRPVLADLGVRFVFIVLLLSGLSFLGLGLQPPNAD 234
           D+V  AR+ G +  YL+   I PNI+  ++A++ +     +L ++ L FLGLG Q P+ +
Sbjct: 187 DYVMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTE 246

Query: 235 WGALVRENIGGLPFAAPAVIFPSLAIASLTISVNLLIDNLPQKI 278
           WGA++ +++  +  A   V  P LAI    + +NL+ D   Q +
Sbjct: 247 WGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQAL 290