Pairwise Alignments

Query, 283 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 315 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  129 bits (323), Expect = 1e-34
 Identities = 91/262 (34%), Positives = 138/262 (52%), Gaps = 15/262 (5%)

Query: 19  NAVGIFAFLVIFIWAMVAIFAPYLIPYPVGDIVDLDYF-----GPMT-SDLW---LGSDY 69
           N + + A + + +    A+F P+L+    GD++D   F      P + S  W   LG+D 
Sbjct: 29  NWLALAAVIFLLLVVACAVFGPWLM----GDLIDKPNFRARNMAPFSLSQGWTYVLGADT 84

Query: 70  LGRDVFSRILMGARFTVGISLAAVTIACVSGVVLGMCAAVVGGWFDAMLSRFLDAVNSIP 129
           LGR + +R+++GA+ T+GI+  AV  + V G +LG+ A    G    M+ R  D V S P
Sbjct: 85  LGRSLLARLVVGAQNTIGIAFFAVFCSVVIGGMLGLIAGYSRGAAGTMIMRGADIVMSFP 144

Query: 130 SKLFGLVVVAAVGSSIPVLIVTLSVIYTPGAYRFARALAVNVNTMDFVTVARVRGESLLY 189
           S L  L+V+ ++G S+  LI+ L++   P   R  RA  + V    FV+ A   G +   
Sbjct: 145 SLLLALIVLFSLGPSVTNLILVLAITRVPIYLRTTRAEVLEVRERMFVSAAVALGANHTR 204

Query: 190 LISSEILPNIIRPVLADLG-VRFVFIVLLLSGLSFLGLGLQPPNADWGALVRENIGGLPF 248
           ++   I P I+ P L  +G + F  +VL  S LSFLGLG+Q P   WGA+V    G L  
Sbjct: 205 ILFRHIAP-IVLPTLVTIGAIDFATVVLAESSLSFLGLGIQAPEFTWGAMVATGRGYLST 263

Query: 249 AAPAVIFPSLAIASLTISVNLL 270
           A     +P LAI   T+S+N+L
Sbjct: 264 AWWIAFWPGLAILLTTLSLNIL 285