Pairwise Alignments

Query, 536 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 531 a.a., oligopeptidemurein peptide ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  105 bits (262), Expect = 4e-27
 Identities = 133/500 (26%), Positives = 208/500 (41%), Gaps = 61/500 (12%)

Query: 44  SAILGRASKAVAATPVSGGSLKAAGWSSSTADTLDPAKASLSTDYVRCCALYSRLTFLDV 103
           S  LG A   +A      G L+ A  +S    TLDP  A+L+ +      +Y RL + D 
Sbjct: 18  SIFLGSAPATLAQ---ERGELRIA--TSYKLMTLDPQYANLNENTSLLSHIYERLVYQDD 72

Query: 104 SGTPQMELAESIETKDAKTWTVKLRSGVTFHDGKSLTADDVVYSLKR---HLDPAVGSKV 160
           +   +  LA S        W  KLR  V FHDG +  ADDVVY+++R    L P  G   
Sbjct: 73  NLELKPGLATSWRPLSDTQWAFKLRDKVRFHDGSAFDADDVVYTIERIRDFLKPPSGG-- 130

Query: 161 AKIAAQMTGFKAVDKNTVEITLANPNADLPSILALHHFMIVADGATDFSKG--------- 211
               + ++G K+V        L   +  +P++      + V +     SKG         
Sbjct: 131 --FRSYVSGIKSVSAPDPLTVLIETDGAVPNLPLFFSSLFVMNRP---SKGFETTENLNA 185

Query: 212 ----NGTGAFKLEKFEPGVRSVMAKNANYWKSGGPHLDSFEFMAISDDNARVNALLSGDI 267
               NGTG ++ E +  G    +A+N +YW  G P      F  I +  ARV AL +G++
Sbjct: 186 GHPPNGTGPYRFESWSSGESLRLARNDDYW-GGKPAWSKVTFRVIENPAARVAALSTGEV 244

Query: 268 QLAAAINPRALRLLDKQDGVVMSKTTSG--NYTNLNIRLDQAPG------------NKTD 313
            +A AI  R +  L KQ G  ++   +   N+   ++  D  PG             K  
Sbjct: 245 DVAHAIPARDVASL-KQRGAKIASVGAARVNFVQFDVARDTLPGVTDKSGEPIANPFKNP 303

Query: 314 FVAGMKSL-INREQIIKAALRGLGEVGNDQPVPPMSPYYNPDLKPKAFDLDKAKFHFEKA 372
            V    +L  +R  ++   L G G     Q  P   P  + +L P+A + D+AK    KA
Sbjct: 304 LVRRALTLATDRGILVDKILAGYGTAA-AQVFPNGLPGTSANLLPEAPNYDEAKMLLAKA 362

Query: 373 GVIGQSIPVIASDAAGSSIDMAMIMQASAAQIGVKLDVQRVPSDGYWSNYWLKAP----- 427
           G       ++ +  AG     A  +QA  AQ   ++ V   P+   +S +  K       
Sbjct: 363 G-FPDGFNLVLAGPAGRYPGDAESLQA-VAQSWARIGVNAQPAAAPFSVFNTKRAAGDYG 420

Query: 428 IHFGNINPRPTPDILFSLLYASD-----APWNESQYKSPKFDKMMLEARGL-LDLEKRKQ 481
           + +G  +      IL SLL + D        N  +Y++  FD M+  A  + +  E+   
Sbjct: 421 VWYGGTSGEAVDIILHSLLASPDPERGTGALNFGKYRNEAFDAMLAGAESIAVGPERNAA 480

Query: 482 IYFEMERMIADEAGTIIPAY 501
           +    E ++AD+   IIP Y
Sbjct: 481 LAQATELVMADQ--PIIPLY 498