Pairwise Alignments

Query, 379 a.a., ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 353 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 36/250 (14%)

Query: 106 SLETAITLSPDVITLNLEAEKSAKESGFEDKAAAAGIKVIYLDFRIDPEKNSEASIEILG 165
           ++E   +L+PDVI     A     + G   +  + GI V+++D  I+   N   +IE++G
Sbjct: 105 NVEEIKSLNPDVIF----APSWGSQQGQYPQLKSLGIPVVFID--IETASNYYKTIEMMG 158

Query: 166 KLFGAEERAKEFIAYRRAEIARVTDRLAGVKDLKRPKVFIERAPGISGEDNCCRTFGPVN 225
           ++F  E  A+E I Y       V  R A + + ++P+V          +++     G   
Sbjct: 159 EVFQKEAYAQELIDYYNQSTNDVLKRTASISENEKPRVLFLVYD--QRKNSYWTPGGEFY 216

Query: 226 FGAMVDLAGGHNIADGIIKTTFGDLNPEQLVIADPDYVIVTGSNWAAESD-INQFVPVGR 284
              ++ +AGG  ++  +  T    +N EQ    +PD +I +       S  + + V    
Sbjct: 217 QNNLITMAGGKTVSSDL-PTGKAQINVEQAASWNPDVIITSAHTMEYPSTKVKEDVLTDE 275

Query: 285 GADMALSRERLANLMKRTPFPELNAVKRGNVHAV------WHQFYGAPYEFFPIQQFAKW 338
           G                  + E+NAVK GNV+A+      W    G+ Y    +   AK 
Sbjct: 276 G------------------WKEINAVKSGNVYAMPFDGESWDTL-GSKY-VLGLYWTAKT 315

Query: 339 FHPDLFADLD 348
            HPD++ D+D
Sbjct: 316 LHPDMYTDVD 325