Pairwise Alignments

Query, 272 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 306 a.a., oligopeptide/dipeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  173 bits (439), Expect = 4e-48
 Identities = 102/276 (36%), Positives = 161/276 (58%), Gaps = 23/276 (8%)

Query: 16  ALLLITAITGLF------WTPYDPMKLGFASRLAAPG------AGHLLGTDEFGRDVLSR 63
           ALL I A++ +        +PYD   L   +    P       A  LLGTD  GRD+LS 
Sbjct: 28  ALLFILAVSAILAPLIAPHSPYDGATLDIMNAELPPAWKPEGTADFLLGTDNQGRDILSA 87

Query: 64  LMVGARASVWIGFLTVSFATICGTLIGLVSGYARGWVDGVIMAINNALLAFPGILLALG- 122
           ++ G R S+ IG   V+  ++ G  +GLVSGY    +D ++M + +  L+F   ++A+  
Sbjct: 88  MLYGMRVSLVIGLGAVALQSVIGIFVGLVSGYGSKRIDSILMRVADVQLSFSSYMVAIFF 147

Query: 123 ---LLAVFGANQYG------IIFALGIAYTPSMARVVRGAVLSLREREFIEASLVMGNGE 173
              L  V G  +Y       +IF +G++  P +AR VR +VL+ +++E++EA+ V+G   
Sbjct: 148 GAILQMVVGVGRYEEVAVPFLIFVIGLSEWPQIARTVRASVLAEKKKEYVEAARVIGLPA 207

Query: 174 IYTMFRHILPNCIAPITVLATSMFGWAILSESALSFLGLGVPPPAPTWGNMLAAG-RPFI 232
              M RHILPN + P+ V++T     A++SE+ALSFLGLG+P   P+ G+++ +G + F 
Sbjct: 208 RRIMLRHILPNTLTPVLVISTVQVANAVMSEAALSFLGLGMPVTQPSLGSLIKSGFQYFF 267

Query: 233 QQAVWLGLFPGLCIALTLLGINLLGDALRDRLDPRM 268
             + W+ LFPG+ + L +L INLLGD LRD L+P++
Sbjct: 268 SGSWWITLFPGIMLILLVLSINLLGDWLRDFLNPKL 303