Pairwise Alignments

Query, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  433 bits (1114), Expect = e-126
 Identities = 232/531 (43%), Positives = 347/531 (65%), Gaps = 11/531 (2%)

Query: 1   MTDNTLLTVRGLSLEVAGSGHRV--VKDVSFDIAPGEIFGIVGESGSGKTLATRALISLL 58
           M+ N LL VR LS+    +   V  VK+VSFDI PGE   IVGESGSGK+++T AL+ LL
Sbjct: 1   MSPNPLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLL 60

Query: 59  PPAIAV-TGGSVIYKGQDVMSLPARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGL 117
           P    +    S++++G+++++    ++RR+RG  IG++FQEPMTSLNP M +G Q+ E +
Sbjct: 61  PKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAI 120

Query: 118 ILHTKLSPEERREKILEMLRRVGIRDPEGALAAYPHEFSGGMRQRIMLASVMLLKPALLI 177
             H  +S  + ++++LE+ + V + DP+GA   +PHEFSGG  QRIM+A  ++ +P +LI
Sbjct: 121 RCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILI 180

Query: 178 ADEPTTALDAVIQRDVMELMVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIVEQG 237
           ADEPTTALD  +Q +V+ L+ E+    G A+L I+HDL +V     R++VM KG +VEQG
Sbjct: 181 ADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQG 240

Query: 238 RTEDLLDAPRHPYTKKLLSSLPFRGEPRSIDTSKAPMVSARGIVVDYAGRKSLLKKAKPK 297
            TE L   P H YT+ L++S+P +G    +    AP++ A  I V +  +   + +    
Sbjct: 241 STEQLFLQPEHDYTRMLINSIP-KGSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQY 299

Query: 298 -RALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVKESEGHIRFQGRERNEDWNDYR 356
             A+ G+S+++ +GE + +VG SGSGK+TLGR + GL+  S G I F+G++        R
Sbjct: 300 FEAVKGISLELKQGETLGIVGESGSGKSTLGRALIGLL-PSTGQIAFKGQDFRALSEKQR 358

Query: 357 L----NCQMVFQDPYSSLDPRMTIQALVEEALRL-VPGLDQAAKRKRALETLEEVGLGVD 411
           L    + QMVFQDPY SL PRMT+  ++ E L +  P + +  + +RA   LEEV L  +
Sbjct: 359 LALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPN 418

Query: 412 YAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGF 471
              RYPHE SGGQRQR+AIARA+   P F++ DEP SALD +V+  V++L  ++QKR   
Sbjct: 419 SINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNI 478

Query: 472 SCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPREAYTRRLLSA 522
             LFISHDL VV+ ++DRV+VMQ G+++E+G  ++IF +P+  YT++L++A
Sbjct: 479 GYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAA 529



 Score =  169 bits (427), Expect = 3e-46
 Identities = 106/268 (39%), Positives = 150/268 (55%), Gaps = 20/268 (7%)

Query: 270 SKAPMVSARGIVVDYAGRKSLLKKAKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRT 329
           S  P++  R + V +     ++   K       VS DI  GE +A+VG SGSGK+     
Sbjct: 2   SPNPLLQVRNLSVSFTTNDGVVDAVK------NVSFDIRPGETLAIVGESGSGKSVSTNA 55

Query: 330 IAGLVKES-----EGHIRFQGRE--RNEDWNDYRLNCQ---MVFQDPYSSLDPRMTIQAL 379
           +  L+ ++     E  I F+G E     D    R+      M+FQ+P +SL+P M +   
Sbjct: 56  LMQLLPKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQ 115

Query: 380 VEEALRLVPGLDQAAKRKRALETLEEVGLGVDYAGRY---PHELSGGQRQRVAIARAIAR 436
           V EA+R    + Q   ++R LE  + V L  D  G Y   PHE SGGQ QR+ IA A+  
Sbjct: 116 VAEAIRCHRNVSQNQAKQRVLELFQLVHLP-DPKGAYQKFPHEFSGGQLQRIMIAMALIN 174

Query: 437 RPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDG 496
            P  LIADEP +ALDVTV+A+VL L  ++Q   G + LFI+HDLGVV+ VADRV+VM  G
Sbjct: 175 EPDILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKG 234

Query: 497 RIIEEGDRDTIFDSPREAYTRRLLSAIP 524
            ++E+G  + +F  P   YTR L+++IP
Sbjct: 235 DVVEQGSTEQLFLQPEHDYTRMLINSIP 262