Pairwise Alignments

Query, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 630 a.a., mureinpeptideoligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  387 bits (993), Expect = e-112
 Identities = 234/571 (40%), Positives = 324/571 (56%), Gaps = 46/571 (8%)

Query: 6   LLTVRGLSL--EVAGSGHRVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLLPPAIA 63
           LL V GL +   V G     V+  +F I PG +  +VGESGSGK+  ++A++ +LP ++A
Sbjct: 7   LLRVEGLRITFSVLGGEVEAVRGANFRILPGRVTALVGESGSGKSAISQAIMGILP-SVA 65

Query: 64  VTGGSVIYKGQDVMSLPA---------RELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLE 114
             GG V++   +  + P          R+++ +RGA I  +FQEPMTSL+P  TIG Q+ 
Sbjct: 66  SVGGRVLFNDPEAEANPVDLLSLDRDGRDIQEIRGARISKIFQEPMTSLSPLHTIGNQIS 125

Query: 115 EGLILHTKLSPEERREKILEMLRRVGIRDPEGALAAYPHEFSGGMRQRIMLASVMLLKPA 174
           E L +HT      RRE+  E+L  VG  DP+ A   YP E SGGMRQR M+A  ++ +PA
Sbjct: 126 EVLKIHTDADKAGRRERTEELLGYVGFSDPKRAYDMYPFELSGGMRQRAMIAMALICRPA 185

Query: 175 LLIADEPTTALDAVIQRDVMELMVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIV 234
           LLIADEPTTALD  +Q  +++L+ EL      A+LLI+HDL +VA     +VV+  G IV
Sbjct: 186 LLIADEPTTALDVTVQAQILQLLRELQSKLNMAMLLITHDLGVVANMADEVVVIYHGEIV 245

Query: 235 EQGRTEDLLDAPRHPYTKKLLSSLP-FRGEP--------------------RSIDTSKAP 273
           E G  + +   PRHPY K L++++P F  +P                    R +  +  P
Sbjct: 246 EAGPVDAIFRNPRHPYLKGLMAAVPHFDMKPGERLKALREVPVKAGAIVGDREVKKAAGP 305

Query: 274 --MVSARGIVVDYAGRKS---LLKKAKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGR 328
             +VS R +   ++ R S       A   RA+  VS DI  GE + LVG SG GKTT+ +
Sbjct: 306 NVLVSVRNLSKTFSTRSSGWFGSGTAYRHRAVDNVSFDIRRGECLGLVGESGCGKTTVSK 365

Query: 329 TIAGLVKESEGHIRFQGRERNED--------WNDYRLNCQMVFQDPYSSLDPRMTIQALV 380
            +   V   +G I F   E   D            R   QMVFQDP SSL PRMT++ ++
Sbjct: 366 ILMRAVTPDKGTITFDDGEGALDVLKLDGGELKALRAKIQMVFQDPVSSLSPRMTVKNIL 425

Query: 381 EEALRLVPGLDQAAKRKRALETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRF 440
            E L +       ++ +     L+ VGL   +  RYPH  SGGQRQR+ IARA+A  P+ 
Sbjct: 426 SEPLEIHGRGTPKSREEHVRSLLQAVGLDQRFINRYPHSFSGGQRQRIGIARALALVPQL 485

Query: 441 LIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIE 500
           LI DEPVSALDV+V+AQ+L+L  DLQK  G + LFISH+L VV+ +ADR+ VM  GRI+E
Sbjct: 486 LICDEPVSALDVSVQAQILNLLKDLQKELGLTMLFISHNLAVVDYMADRIAVMCAGRIVE 545

Query: 501 EGDRDTIFDSPREAYTRRLLSAIPALDQNEK 531
              R+ +  +P   YTR LL+A+P  D + K
Sbjct: 546 LAPREVLMRNPVHPYTRSLLAAVPYPDLDRK 576



 Score =  181 bits (459), Expect = 7e-50
 Identities = 111/276 (40%), Positives = 158/276 (57%), Gaps = 14/276 (5%)

Query: 4   NTLLTVRGLSLEVA-------GSG----HRVVKDVSFDIAPGEIFGIVGESGSGKTLATR 52
           N L++VR LS   +       GSG    HR V +VSFDI  GE  G+VGESG GKT  ++
Sbjct: 306 NVLVSVRNLSKTFSTRSSGWFGSGTAYRHRAVDNVSFDIRRGECLGLVGESGCGKTTVSK 365

Query: 53  ALISLLPPAIAVTGGSVIYKGQDVMSLPARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQ 112
            L+  + P              DV+ L   EL+ LR A+I +VFQ+P++SL+P MT+   
Sbjct: 366 ILMRAVTPDKGTITFDDGEGALDVLKLDGGELKALR-AKIQMVFQDPVSSLSPRMTVKNI 424

Query: 113 LEEGLILHTKLSPEERREKILEMLRRVGIRDPEGALAAYPHEFSGGMRQRIMLASVMLLK 172
           L E L +H + +P+ R E +  +L+ VG+   +  +  YPH FSGG RQRI +A  + L 
Sbjct: 425 LSEPLEIHGRGTPKSREEHVRSLLQAVGL--DQRFINRYPHSFSGGQRQRIGIARALALV 482

Query: 173 PALLIADEPTTALDAVIQRDVMELMVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGA 232
           P LLI DEP +ALD  +Q  ++ L+ +L +  G  +L ISH+L +V     RI VM  G 
Sbjct: 483 PQLLICDEPVSALDVSVQAQILNLLKDLQKELGLTMLFISHNLAVVDYMADRIAVMCAGR 542

Query: 233 IVEQGRTEDLLDAPRHPYTKKLLSSLPFRGEPRSID 268
           IVE    E L+  P HPYT+ LL+++P+    R +D
Sbjct: 543 IVELAPREVLMRNPVHPYTRSLLAAVPYPDLDRKLD 578