Pairwise Alignments

Query, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  418 bits (1074), Expect = e-121
 Identities = 226/535 (42%), Positives = 330/535 (61%), Gaps = 11/535 (2%)

Query: 1   MTDNTLLTVRGLSLEVA--GSGHRVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLL 58
           MT   LL V+ L+++    G   R    VSF +  GE   I+GESGSGK+++  A++ L+
Sbjct: 1   MTGPHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLI 60

Query: 59  P-PAIAVTGGSVIYKGQDVMSLPARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGL 117
             P   +  GSV Y+G+D+ SL   E R L G  I ++FQ+P++ LNP  TIG QLEE  
Sbjct: 61  DTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVF 120

Query: 118 ILHTKLSPEERREKILEMLRRVGIRDPEGALAAYPHEFSGGMRQRIMLASVMLLKPALLI 177
            +H   S  E R++ +E+L RVGI +PE  +  YPH+FSGG RQRIM+   + L+P +LI
Sbjct: 121 TVHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILI 180

Query: 178 ADEPTTALDAVIQRDVMELMVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIVEQG 237
           ADEPTTALD  +Q  ++EL+ +L   +G A+++I+HDL + A    R++VM+ G IVE+G
Sbjct: 181 ADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEG 240

Query: 238 RTEDLLDAPRHPYTKKLLSSLPF---RGEPRSIDTSKAPMVSARGIVVDYAGRKSLLKKA 294
               + + P H YT+ L+++LP    R  PR    +  P++  + I   Y        K 
Sbjct: 241 EARAVFENPAHSYTRTLINALPHADDRAPPRPARPAGKPILEVKNIDKFYTLSSGFFAKP 300

Query: 295 KPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVKESEGHIRFQGRE----RNE 350
               A+  +S D+  GE + +VG SGSGK+T+ R + GL + S G   F GR+      +
Sbjct: 301 ARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMDRK 360

Query: 351 DWNDYRLNCQMVFQDPYSSLDPRMTIQALVEEALRLVPG-LDQAAKRKRALETLEEVGLG 409
               +R   QMVFQDPYSS++PRMT+  +V E  R+    L++   R R  E L  VGL 
Sbjct: 361 QLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLN 420

Query: 410 VDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRY 469
            ++A RYPH+ SGGQRQR+AIARA+A  P  ++ DE VSALDV+V+ QV+DL ++L+ R 
Sbjct: 421 PEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRL 480

Query: 470 GFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPREAYTRRLLSAIP 524
           G + +FI+HDL +V   ADR++VM+ G I+E    + IF +P+ AYTR+L++A P
Sbjct: 481 GLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINATP 535



 Score =  177 bits (450), Expect = 7e-49
 Identities = 103/244 (42%), Positives = 143/244 (58%), Gaps = 16/244 (6%)

Query: 298 RALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVKESEGHI-----RFQGRE----- 347
           RA  GVS  +  GE + ++G SGSGK+     I GL+    G I      ++GR+     
Sbjct: 24  RATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPGDICAGSVAYRGRDLSSLS 83

Query: 348 --RNEDWNDYRLNCQMVFQDPYSSLDPRMTIQALVEEALRLVPGLDQAAKRKRALETLEE 405
                D N  R+   M+FQDP S L+P  TI   +EE   +      A  R+RA+E L  
Sbjct: 84  EGERRDLNGRRI--AMIFQDPLSHLNPVYTIGWQLEEVFTVHGVASGAEARQRAIEILGR 141

Query: 406 VGLGVDYA--GRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFS 463
           VG+        +YPH+ SGGQRQR+ I  AIA RP  LIADEP +ALDV+V+AQ+L+L  
Sbjct: 142 VGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPTTALDVSVQAQILELLK 201

Query: 464 DLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPREAYTRRLLSAI 523
            LQ   G + + I+HDL V   +ADRV+VM+ GRI+EEG+   +F++P  +YTR L++A+
Sbjct: 202 KLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAVFENPAHSYTRTLINAL 261

Query: 524 PALD 527
           P  D
Sbjct: 262 PHAD 265