Pairwise Alignments

Query, 309 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 311 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25-INTG

 Score =  262 bits (669), Expect = 9e-75
 Identities = 150/303 (49%), Positives = 198/303 (65%), Gaps = 9/303 (2%)

Query: 9   AMSVLL--GTAAHAET-VGVSMALFDDNFLTVLRNGMLDYSKELK---GVTLQVEDAQND 62
           A+S+LL  G A+ A+  +GVSM+ FDD FLT LR  M   +K      GV LQ EDA+ D
Sbjct: 11  ALSMLLASGFASAADLKIGVSMSAFDDTFLTYLREDMDKQAKSYPKGDGVQLQFEDARAD 70

Query: 63  VAKQQSQIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVNVDSLPDGQ 122
           V KQ SQ++NFI+ KVDAIIVNPVDT +T  +   A  A IPLV+VNR+P   D LP   
Sbjct: 71  VVKQLSQVENFISQKVDAIIVNPVDTASTKNIINAATKAGIPLVFVNRRPDQKD-LPKDV 129

Query: 123 AFVASDETVAGTLEAKEVCRLLGGKGNAVIMMGELSNQAARMRTQSAKDVLKTDECKGIS 182
             V SD+  AG L+ + +   LGGKG  VI++G+L+N +   RT+  K+VL   +   I 
Sbjct: 130 VAVTSDDIEAGRLQMQYIAEKLGGKGKIVILLGDLANNSTTNRTKGVKEVLA--KYPDIK 187

Query: 183 VVEEQTANWQRTQGSDLVTNWLSSGIEFNAVIANNDEMAIGAIQALKAAGKDMKSYVVAG 242
           + +EQT  W R +G  LV +WL+ G EFNAV+ANNDEMAIGA  ALK+AG    S ++AG
Sbjct: 188 IEQEQTGIWLRDKGMTLVNDWLTQGREFNAVLANNDEMAIGASMALKSAGTKPGSVLIAG 247

Query: 243 VDATQDALAAMQAGDLDVTVFQDAAGQGKGALDAALKLVKGDKIEKKVYIPFQLVTPENV 302
           VD T D L A+  GD+  + FQDA GQ  G+++AA K+ K + +E+ V IPFQL+TPENV
Sbjct: 248 VDGTPDGLNAITKGDMAASAFQDAKGQAVGSVEAARKMAKKEPVEQNVIIPFQLITPENV 307

Query: 303 KDY 305
             +
Sbjct: 308 AQF 310