Pairwise Alignments

Query, 309 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 296 a.a., Ribose import binding protein RbsB from Enterobacter sp. TBS_079

 Score =  130 bits (326), Expect = 5e-35
 Identities = 87/301 (28%), Positives = 156/301 (51%), Gaps = 14/301 (4%)

Query: 1   MKKF---IIGAAMSVLLGTAAHA-ETVGVSMALFDDNFLTVLRNGMLDYSKELKGVTLQV 56
           MKK    +   A+S  +   A A +T+ + ++  ++ F   L++G    + +L G  L V
Sbjct: 3   MKKLATLVSAVALSATVSANAMAKDTIALVISTLNNPFFVSLKDGAQKEADKL-GYNLVV 61

Query: 57  EDAQNDVAKQQSQIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVNVD 116
            D+QN+ AK+ + +Q+        +++NP D+DA     K+A  AKIP++ ++RQ    D
Sbjct: 62  LDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQAKIPVITLDRQATKGD 121

Query: 117 SLPDGQAFVASDETVAGTLEAKEVCRLLGGKGNAVIMMGELSNQAARMRTQSAKDVLKTD 176
            +    + +ASD  + G +    + +  G     + + G     AAR R +  +  +   
Sbjct: 122 VV----SHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAH 177

Query: 177 ECKGISVVEEQTANWQRTQGSDLVTNWLSSGIEFNAVIANNDEMAIGAIQALKAAGKDMK 236
           +    +V+  Q A++ RT+G +++ N L++  +  AV A NDEMA+GA++AL+ AGK   
Sbjct: 178 K---FNVLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGK--S 232

Query: 237 SYVVAGVDATQDALAAMQAGDLDVTVFQDAAGQGKGALDAALKLVKGDKIEKKVYIPFQL 296
             +V G D T D   A++ G L  T+ Q     G   +  A K++KG+K++ K  +  +L
Sbjct: 233 DVMVVGFDGTPDGEKAVKDGKLAATIAQLPEQIGATGVQTADKVLKGEKVQAKYPVDLKL 292

Query: 297 V 297
           V
Sbjct: 293 V 293